Gene Pfl01_5484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5484 
Symbol 
ID3713808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6151490 
End bp6152728 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID 
ProductHemY-like 
Protein accessionYP_351212 
Protein GI77461705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGTATGTGAT CGTGTTTCTG GTGATCGCGG CAACGGCGGC GCTGGGTCTG 
GCGATTGCCG AGCATTCCGG TTACGTGCTG GTCGCCTACA AAAGCTTTCG TTATGAATCG
AGCCTGTGGG CAACCCTGGC AGTGGTGGCG GTGCTGTGGC TGCTGGTCTG GGGTATCAAG
GCGCTGGTCG AACTGGTGCT GACCTCCGGC GGCGTGGTCA ATCCATGGTC GCGTCGCAAC
CGCAGCCGTC GCGTGCAGGT GGCGATCGAG CACGGTCAGC TCGACCTGGC CGAAGGTCGC
TGGGCCAGTG CCCAGCGTCA CCTTTACCGG GCCGCCGAAG CCGAGCGTCA ACCGTTGCTG
TATTACCTGG GTGCCGCCCG CGCCGCCAAC GAACAAGGCA ACTACGAGGA AAGCGATCGC
CTGCTGGAGC GCGCGCTCGA GCGTCAGCCG CAGGCCGAAC TGGCGATCGC CCTCAGCCAT
GCGCAGTTGC AGACCGATCG TGGCGATACC GATGGTGCGC TGGTCACATT GCAGGCGATG
CACGAGCGCC ATCCGCACAA TGTCCAGACC CTGCGTCAGT TGCAGCGCCT GCATCAGCAG
CGCGGTGACT GGTCGTCAGT GATCCGGCTG TTGCCGGAGC TGCGCAAGGA CAAAGTTCTG
CCACCGGCCG AACTGACCGA ACTCGAGCGT CGTGCCTGGG GAGAAAACCT CTCCCTGGCG
GCGCATCGCG AAGAGGATGG TGCGGTGGGT TTGCAGTCGC TGAACCGGGC CTGGCAGCAA
CTGACGTCTG CCCAGCGTCA GGAGCCTGCG CTGGTGCTGG CATACGCCGA GCAACTGCGT
CAGCTGGGCG CTCAGGTAGA GGCGGAAGAA GTTTTGCGCA CGGCGCTCAA GCGCAAGTAC
GACAGCCATC TGGCGCGCCT CTATGGTCTG GTACGTGGCA GTGACCCGGC GCGGCAGTTG
CAGACGGCGG AAGGCTGGCT CAAGGATCAT CCGGGCGATG CCAGCCTGCT GCTGACGCTG
GGACGTCTGT GCCTGCAAGC CAGTCTTTGG GGCAAGGCGC GGGATTACCT GGAAAGCAGC
CTGCGCGTGC AGCGCAATCC GGAAGCGTGC GCGGAACTGG CTCGTCTTCT GGCACGGCTT
GGCGACACTG ACCGTAGCAA CATGTTGTTC CAGGAGGGCC TCGGTCTGCT GGACGAGCGC
TTGCTCGCAG CACCGCTGCC GGTGGCGGCT CGCGCGTGA
 
Protein sequence
MKRLYVIVFL VIAATAALGL AIAEHSGYVL VAYKSFRYES SLWATLAVVA VLWLLVWGIK 
ALVELVLTSG GVVNPWSRRN RSRRVQVAIE HGQLDLAEGR WASAQRHLYR AAEAERQPLL
YYLGAARAAN EQGNYEESDR LLERALERQP QAELAIALSH AQLQTDRGDT DGALVTLQAM
HERHPHNVQT LRQLQRLHQQ RGDWSSVIRL LPELRKDKVL PPAELTELER RAWGENLSLA
AHREEDGAVG LQSLNRAWQQ LTSAQRQEPA LVLAYAEQLR QLGAQVEAEE VLRTALKRKY
DSHLARLYGL VRGSDPARQL QTAEGWLKDH PGDASLLLTL GRLCLQASLW GKARDYLESS
LRVQRNPEAC AELARLLARL GDTDRSNMLF QEGLGLLDER LLAAPLPVAA RA