Gene Pfl01_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5471 
Symbol 
ID3713853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6139474 
End bp6140847 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351199 
Protein GI77461692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0735646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAC GCCTGCTACT CCCGGTATTA ATCAGCACGA TCCTGCAACT GAGCGGCTGC 
GCGGCTTACC GCAATTACGA CCTGGAAATG CAGCAAACCA ACGACCGGCT GATGCTCGGC
GACTATCAGG GTGCCCTGGA TGTGCTGGAG TGGCACAACC CGTGGGAAGA CAAGGACCTG
CTCTACTACT TCGAGAAGGG TTCGATTCTC AGCTTCGCCA ACGCCCGCCC GCAGAGCCAG
AAAGCCTGGC GCAGCGCAGA CCGGATGGTG TTCCAGCGCG AAGAAGCCGT GCCTTCCGCC
CCCATGAAGC TGCTCAACCG GTTTGCCTAT GAAATGGGCA CCCTGCTGGT CAACGACAAG
CTCAGCCGCT ACGAAGGCTA TGACTACGAA AAAGTCATGC TGACCATACA GATGGCCCTC
AACCAATTGG GCGAAAGCGA TTTCGACGGC GCCCGGGCAG ACATCAAGAA GACCCACGAA
CGTGAAGCAC TGATCGCCCG CCAGCGGGAG CGCCAGTATG AAGAGCTCGA GGAACAGGCC
AAAGCTCAAG GCATCGTCGT GCAATACAAG GATCTGCGGG GCTATCCCGT CACCACCCTG
GACGCGCCAG CAGTTACCGA ACTGAAGAAC GGCTACCAGA GTGCTTTCAG CCATTACCTG
GCCGGGTTCA CCTACGAAGC GCTGGGTGAA CGGGATCTGG CCGCACCGGG TTATCGCCAG
GCAATCGAGT TGCGCCCGAA CACGCCCTTC CTCGAACAGG CGCTGCGCAA TCTCGACCAG
CCACCGGCCA AGGATGATGA AAGCGATGTT CTGATCGTCG TCCAGAGCGG TCTGGCGCCG
GCCCGCAGCT CGGTAACGGT GCCGATCCCG GTGCGGCTCA ATGAAAATCT GGTCATTACC
GCGCCGATCT CGTTTCCCAT CCTGGTGCCG GACACCGTCA CACCAGCGTT CGACCACATC
CTGGTGGATG GCCGCAAACG CCCGCTGACC GTGATCAACA GCGTCACCGA CATGGCGTTT
CGTACGCTGC GCGATGACAT GCCGGCGATT ATTTCCCGGG CAATGTTCCG CGCCAACATG
GCCGCCATTT CCCAGGCTCA GGAAAACGAA CGCAATCCGG CCAAGGCCTC GCTGGTCGTC
ACCGAGCACG ACCCCTTTGA GGAGGCCGAC ACCCGAACGT GGCGCACGCT CCCCGACAAG
ACACTGGTGG CACGCATTAG ACTGAAGAAA GGCGATCATC GATTCAATGC ACCCAATGCG
CCCGGAGCGT CATCGGTCAT CCTGCGCATC GACCGCGATC ACCAGTTGGT CAACCTGCGA
GTTCTGAGAG ATGTCGCCAA CGTCATCGGC AATGCCAGAT TGCCGGATAA GTAA
 
Protein sequence
MRQRLLLPVL ISTILQLSGC AAYRNYDLEM QQTNDRLMLG DYQGALDVLE WHNPWEDKDL 
LYYFEKGSIL SFANARPQSQ KAWRSADRMV FQREEAVPSA PMKLLNRFAY EMGTLLVNDK
LSRYEGYDYE KVMLTIQMAL NQLGESDFDG ARADIKKTHE REALIARQRE RQYEELEEQA
KAQGIVVQYK DLRGYPVTTL DAPAVTELKN GYQSAFSHYL AGFTYEALGE RDLAAPGYRQ
AIELRPNTPF LEQALRNLDQ PPAKDDESDV LIVVQSGLAP ARSSVTVPIP VRLNENLVIT
APISFPILVP DTVTPAFDHI LVDGRKRPLT VINSVTDMAF RTLRDDMPAI ISRAMFRANM
AAISQAQENE RNPAKASLVV TEHDPFEEAD TRTWRTLPDK TLVARIRLKK GDHRFNAPNA
PGASSVILRI DRDHQLVNLR VLRDVANVIG NARLPDK