Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5471 |
Symbol | |
ID | 3713853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6139474 |
End bp | 6140847 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351199 |
Protein GI | 77461692 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0735646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAAC GCCTGCTACT CCCGGTATTA ATCAGCACGA TCCTGCAACT GAGCGGCTGC GCGGCTTACC GCAATTACGA CCTGGAAATG CAGCAAACCA ACGACCGGCT GATGCTCGGC GACTATCAGG GTGCCCTGGA TGTGCTGGAG TGGCACAACC CGTGGGAAGA CAAGGACCTG CTCTACTACT TCGAGAAGGG TTCGATTCTC AGCTTCGCCA ACGCCCGCCC GCAGAGCCAG AAAGCCTGGC GCAGCGCAGA CCGGATGGTG TTCCAGCGCG AAGAAGCCGT GCCTTCCGCC CCCATGAAGC TGCTCAACCG GTTTGCCTAT GAAATGGGCA CCCTGCTGGT CAACGACAAG CTCAGCCGCT ACGAAGGCTA TGACTACGAA AAAGTCATGC TGACCATACA GATGGCCCTC AACCAATTGG GCGAAAGCGA TTTCGACGGC GCCCGGGCAG ACATCAAGAA GACCCACGAA CGTGAAGCAC TGATCGCCCG CCAGCGGGAG CGCCAGTATG AAGAGCTCGA GGAACAGGCC AAAGCTCAAG GCATCGTCGT GCAATACAAG GATCTGCGGG GCTATCCCGT CACCACCCTG GACGCGCCAG CAGTTACCGA ACTGAAGAAC GGCTACCAGA GTGCTTTCAG CCATTACCTG GCCGGGTTCA CCTACGAAGC GCTGGGTGAA CGGGATCTGG CCGCACCGGG TTATCGCCAG GCAATCGAGT TGCGCCCGAA CACGCCCTTC CTCGAACAGG CGCTGCGCAA TCTCGACCAG CCACCGGCCA AGGATGATGA AAGCGATGTT CTGATCGTCG TCCAGAGCGG TCTGGCGCCG GCCCGCAGCT CGGTAACGGT GCCGATCCCG GTGCGGCTCA ATGAAAATCT GGTCATTACC GCGCCGATCT CGTTTCCCAT CCTGGTGCCG GACACCGTCA CACCAGCGTT CGACCACATC CTGGTGGATG GCCGCAAACG CCCGCTGACC GTGATCAACA GCGTCACCGA CATGGCGTTT CGTACGCTGC GCGATGACAT GCCGGCGATT ATTTCCCGGG CAATGTTCCG CGCCAACATG GCCGCCATTT CCCAGGCTCA GGAAAACGAA CGCAATCCGG CCAAGGCCTC GCTGGTCGTC ACCGAGCACG ACCCCTTTGA GGAGGCCGAC ACCCGAACGT GGCGCACGCT CCCCGACAAG ACACTGGTGG CACGCATTAG ACTGAAGAAA GGCGATCATC GATTCAATGC ACCCAATGCG CCCGGAGCGT CATCGGTCAT CCTGCGCATC GACCGCGATC ACCAGTTGGT CAACCTGCGA GTTCTGAGAG ATGTCGCCAA CGTCATCGGC AATGCCAGAT TGCCGGATAA GTAA
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Protein sequence | MRQRLLLPVL ISTILQLSGC AAYRNYDLEM QQTNDRLMLG DYQGALDVLE WHNPWEDKDL LYYFEKGSIL SFANARPQSQ KAWRSADRMV FQREEAVPSA PMKLLNRFAY EMGTLLVNDK LSRYEGYDYE KVMLTIQMAL NQLGESDFDG ARADIKKTHE REALIARQRE RQYEELEEQA KAQGIVVQYK DLRGYPVTTL DAPAVTELKN GYQSAFSHYL AGFTYEALGE RDLAAPGYRQ AIELRPNTPF LEQALRNLDQ PPAKDDESDV LIVVQSGLAP ARSSVTVPIP VRLNENLVIT APISFPILVP DTVTPAFDHI LVDGRKRPLT VINSVTDMAF RTLRDDMPAI ISRAMFRANM AAISQAQENE RNPAKASLVV TEHDPFEEAD TRTWRTLPDK TLVARIRLKK GDHRFNAPNA PGASSVILRI DRDHQLVNLR VLRDVANVIG NARLPDK
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