Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5466 |
Symbol | |
ID | 3713848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6134262 |
End bp | 6134918 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351194 |
Protein GI | 77461687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.939965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0246648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCAAC AATTTCTGCA TGACTTCGGC TACTTTGCCC TGTTTCTCGG GACGTTTTTC GAAGGCGAAA CCATCCTGGT GCTCGCGGGC TTCCTCGCGT TCCGTGAATA CATGGACATC AAACTGGTGG TGGTCGTGGC GTTCTTCGGC AGTTATGCCG GCGATCAGCT GTGGTACTTC CTGGGCCGCA AGCACGGGCG CAAGTTGCTG GCGCGCAAAC CGCGCTGGCA GATGATGGGC GACCGCGCGC TGGAACACAT CCGCAAGCAC CCGGACATCT GGGTCCTGAG CTTTCGCTTC GTGTACGGAC TGCGCACGGT GATGCCGGTG GCAATCGGCC TCTCGGGCTA TCCGCCGGGA CGCTATCTGC TGCTGAACGG GATTGGCGCG GCGATCTGGG CCACCGCCCT GGCCGCCGCC GCTTACCATT TCGGCGCCGT GCTCGAAGGC ATGCTCGGCA GCATCAAGAA GTATGAGTTG TGGGTGCTGG GCGCGCTGCT GGTACTCGGC CTAGGCCTGT GGCTGCGCCG CCGGTTCAAG AATGCCCGGC TGGCGAAAAA GGTTTACGAG GAAGAACAGG CCGAGCTGCT GGCCAAGGCC GAACGACACA AAACCGAAAT GACCAACGCC GCCGATCCTA AGACGCCAGC CGAGTAA
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Protein sequence | MLQQFLHDFG YFALFLGTFF EGETILVLAG FLAFREYMDI KLVVVVAFFG SYAGDQLWYF LGRKHGRKLL ARKPRWQMMG DRALEHIRKH PDIWVLSFRF VYGLRTVMPV AIGLSGYPPG RYLLLNGIGA AIWATALAAA AYHFGAVLEG MLGSIKKYEL WVLGALLVLG LGLWLRRRFK NARLAKKVYE EEQAELLAKA ERHKTEMTNA ADPKTPAE
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