| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5460 |
|---|
| Symbol | |
|---|
| ID | 3714076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6126927 |
|---|
| End bp | 6127607 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_351188 |
|---|
| Protein GI | 77461681 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0202698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATC AGTTCGATTT CTTGCCGGTG GTGGAAAACA CCGACCTGCT GCTGCGCGGG
GCGTTGTTCA CCCTTGAGCT AACGGCCATC GGCGCGCTGT TCGGGGTTGG CGTGGGCATC
GTCGGAGCGC TGGTGCGGGC GTGGAACATC CGCCCGTTCT CGACGATCTT CGGCGTTTAT
GTGGAGTTGA TCCGCAACAC GCCGTTTCTG GTGCAGTTGT TCTTCATCTT CTTCGGTCTG
CCGTCCCTCG GCGTGCAGAT TTCCGAGTGG CAAGCGGCGG TGCTGGCGAT GGTGATCAAC
CTCGGCGCGT ATTCGACCGA GATCATCCGC GCCGGCATCC AGGCGATTCC GCGCGGGCAG
CTGGAAGCTG CGGCGGCATT GGCGATGAGC CGTTTCGAAG CGTTCCGCCA CGTGGTGCTG
CTGCCGGCAC TGGGCAAAGT GTGGCCGGCG CTGAGTAGCC AGATCATCAT CGTCATGCTC
GGTTCGGCGG TGTGTTCGCA GATCGCCACC GAGGAGTTGA GCTTCGCTGC CAACTTCATT
CAGTCGCGCA ACTTCCGCGC CTTTGAAACC TACGCCCTGA CCACCCTCAT TTATCTGTGC
ATGGCGCTGC TGATCCGGCA GTTGCTGAAC TGGCTCGGTC GGCGCTACCT CTCGAAAAGC
AGCGCAAGGA GCAGCCAATG A
|
|---|
| Protein sequence | MAYQFDFLPV VENTDLLLRG ALFTLELTAI GALFGVGVGI VGALVRAWNI RPFSTIFGVY
VELIRNTPFL VQLFFIFFGL PSLGVQISEW QAAVLAMVIN LGAYSTEIIR AGIQAIPRGQ
LEAAAALAMS RFEAFRHVVL LPALGKVWPA LSSQIIIVML GSAVCSQIAT EELSFAANFI
QSRNFRAFET YALTTLIYLC MALLIRQLLN WLGRRYLSKS SARSSQ
|
|---|
| |