Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5459 |
Symbol | |
ID | 3714075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6126120 |
End bp | 6126905 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_351187 |
Protein GI | 77461680 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.020416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGC GTTACAGCGC CCTCCTCGCC GCCCTGTTTG CCGGTCTGAT GCTGAGCCAG GCCCCCGCCC ATGCCGACGG TCTGGATGAC GTGGTCAAAC GCGGCACCTT GAAAGTCGCC GTGCCTCAGG ACTTTCCGCC GTTCGGTTCG GTCGGCCCGG ACATGAAGCC GCGCGGCCTC GATATCGACA CCGCGAAACT GCTGGCCGAA CAGCTCAAGG TCAAACTCGA ACTCACCCCG GTCAACAGCA CCAACCGCAT CCCGTTCCTC ACCACCGGCA AGGTCGATCT GGTGATTTCC AGCCTCGGCA AGAACCCCGA GCGGGAGAAG GTCATCGACT TCTCCCGCGC CTACGCGCCG TTCTACCTCG CCGTGTTCGG CCCGCCGGAC GCAGCCGTCA GCACCCTCGA CGATCTCAAG GGCAAAACCA TCAGCGTCAC CCGTGGTGCC ATCGAAGACA TCGAGCTGAC CAAGGTCGCC CCCGAAGGCG TGACCATCAA GCGCTTCGAA GACAACAACT CGACCATCGC CGCCTACCTC GCAGGCCAGG TCGACCTGAT CGCCAGCGGC AACGTGGTGA TGGTCGCGAT CAGCGAAAAG AACCCGAAAC GCGTGCCCGC GCTGAAAGTG AAGCTCAAGG ATTCTCCGGT CTACGTCGGC GTGAACAAGA ACGAGCCGGC GCTGCTGGGC AAGGTCAACG AGATCCTGAC CACCGCCAAG GCTGACGGCG CACTGGAAAA AAATGCGCAG ACCTGGCTCA AAGAGCCGCT GCCGGCCGAT CTCTGA
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Protein sequence | MTKRYSALLA ALFAGLMLSQ APAHADGLDD VVKRGTLKVA VPQDFPPFGS VGPDMKPRGL DIDTAKLLAE QLKVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPEREK VIDFSRAYAP FYLAVFGPPD AAVSTLDDLK GKTISVTRGA IEDIELTKVA PEGVTIKRFE DNNSTIAAYL AGQVDLIASG NVVMVAISEK NPKRVPALKV KLKDSPVYVG VNKNEPALLG KVNEILTTAK ADGALEKNAQ TWLKEPLPAD L
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