Gene Pfl01_5459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5459 
Symbol 
ID3714075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6126120 
End bp6126905 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_351187 
Protein GI77461680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.020416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC GTTACAGCGC CCTCCTCGCC GCCCTGTTTG CCGGTCTGAT GCTGAGCCAG 
GCCCCCGCCC ATGCCGACGG TCTGGATGAC GTGGTCAAAC GCGGCACCTT GAAAGTCGCC
GTGCCTCAGG ACTTTCCGCC GTTCGGTTCG GTCGGCCCGG ACATGAAGCC GCGCGGCCTC
GATATCGACA CCGCGAAACT GCTGGCCGAA CAGCTCAAGG TCAAACTCGA ACTCACCCCG
GTCAACAGCA CCAACCGCAT CCCGTTCCTC ACCACCGGCA AGGTCGATCT GGTGATTTCC
AGCCTCGGCA AGAACCCCGA GCGGGAGAAG GTCATCGACT TCTCCCGCGC CTACGCGCCG
TTCTACCTCG CCGTGTTCGG CCCGCCGGAC GCAGCCGTCA GCACCCTCGA CGATCTCAAG
GGCAAAACCA TCAGCGTCAC CCGTGGTGCC ATCGAAGACA TCGAGCTGAC CAAGGTCGCC
CCCGAAGGCG TGACCATCAA GCGCTTCGAA GACAACAACT CGACCATCGC CGCCTACCTC
GCAGGCCAGG TCGACCTGAT CGCCAGCGGC AACGTGGTGA TGGTCGCGAT CAGCGAAAAG
AACCCGAAAC GCGTGCCCGC GCTGAAAGTG AAGCTCAAGG ATTCTCCGGT CTACGTCGGC
GTGAACAAGA ACGAGCCGGC GCTGCTGGGC AAGGTCAACG AGATCCTGAC CACCGCCAAG
GCTGACGGCG CACTGGAAAA AAATGCGCAG ACCTGGCTCA AAGAGCCGCT GCCGGCCGAT
CTCTGA
 
Protein sequence
MTKRYSALLA ALFAGLMLSQ APAHADGLDD VVKRGTLKVA VPQDFPPFGS VGPDMKPRGL 
DIDTAKLLAE QLKVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPEREK VIDFSRAYAP
FYLAVFGPPD AAVSTLDDLK GKTISVTRGA IEDIELTKVA PEGVTIKRFE DNNSTIAAYL
AGQVDLIASG NVVMVAISEK NPKRVPALKV KLKDSPVYVG VNKNEPALLG KVNEILTTAK
ADGALEKNAQ TWLKEPLPAD L