| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5455 |
|---|
| Symbol | |
|---|
| ID | 3714071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6121027 |
|---|
| End bp | 6123024 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_351183 |
|---|
| Protein GI | 77461676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0257346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC TCGCTTATCG AAGGGATATC GACGGCTTGC GGGCAGTCGC GGTGATTGCC
GTGGTGCTGT TCCATTTTGG CGTCCCGGGT TTCACCGGCG GTTTTGTCGG TGTGGACGTG
TTTTTCGTGA TTTCCGGTTA CCTCATCACC TCGATCATCT GGAACCAGCG CCAGACCGGC
CGTTTCAGTT TCGTCGAGTT CTGGTTGCGG CGTGCGCGGC GGATTCTGCC TGCGCTGTTT
GCGATGATCA TCGCGGTGCT GGCGGTGGGC TGGTTTCTCA TGGCGCCCAA GGACTACGAA
GAGCTCGGGC GCTCGGTGCG TTATCAGGTG ATGTTCGTCT CGAACATCCT GTTCATGCGC
CAGGACGGCT ATTTCGATGT CGCCTCGGAC CTCAAACCGC TGCTGCACAC CTGGTCGCTG
GCGGTGGAGG AACAGTTCTA TATCGTCTTC CCGCTGTTGC TGACGCTGAT GTCGAGTCGC
TTGAAACACT GGCGGCTGGC GTTGTTCGGC GTACTGCTCG TGTCGTTCGG GCTGAGCGTC
TGGGCGGTCC ATCAGCACCC GGAAAAAGCC TTCTTTCTGT TACCGATGCG AGCGTGGGAG
CTGCTGGCCG GAGCGATGCT GGCGATCGCG CCGATGCATG GCTGGCGCCT CAAGCCGATG
GCGGCGCAAT TCTTGAGCTT GCTCGGCATG GGCCTGATTC TGTTGGCGGT GTTCGGTTTC
GACAAGCGCA CGCCGTTTCC CGGTGCGGCT GCATTGCTGC CGGTGCTTGG CGTTGTGCTG
CTGATTCTGG CCAACGGTCA TCGCCAGACC TGGGTGGGTC AATTCTTGAG CAGTCGGGCC
ATGGTCGGCC TGGGCCTGAT TTCCTATTCC TGGTATTTGT GGCACTGGCC GGTGTTCGTG
TTTTCCAGCT ACGCCAGCGT CGAGGAACCG GGCGCCTTCG ACAGCGCCGG GATGATCCTG
CTGACGCTGG TGCTGGGTTA TCTGTCATGG AAACTCATCG AGACGCCATT TCGCGAGCGT
CGCGTCTTGG CCGGGCGTCG GCAGATTCTC CTGGCCGGTG CCTGCGGCGT GCTGGTGCTT
GGGTTGGCCG GACAAACCCT GCGCTGGACC GATGGGTTGC CATGGCGGTT GTCCGATCAG
GCGCTGCAAT ACGCCAAGGG CCGTGAATGG CGGCCGGAGT TGATGGCATG CCTGGCCGAC
GACAAGACTC CCGATGACAA GCTGTTTTGC CATTACGGAT TGCAAAACCG TGCTTCGCGG
GCGCTGGTCT GGGGCGACAG TCATGCCACG GCGTTGATCC CGGTCTTTGA TGACGGGGCA
AAAGCCCATG GCGTCAGCGT GATGCTCGCC AGTTCGCCGG GCTGCATACC GGTGGAAGGT
CTTGAGCATG ACGCCCGCTG CGCGCGGTTC AACCAACGAG TGGTGCAGGC AATCAAACCG
CAAGCCGTCA GTGATGTGGT GCTGGTTGCG CGCTGGAGTC TGTATCTCTA TGGCGATGCC
AAAGGTGATC TGGGCCATGT CTTGAGAACG CCTGACGGGC AATACGACCG TGCCGTCGCC
GAGCAACGCC TGACTGATGG TCTGCGCGCG CGGGTGGCGC AGTTGCGGGC CGGTGGGCAT
CGGGTCTGGC TGGTAAAAGA GGCGCCGTTG CAGGACTTCA GCCCGCCATA CCGTCTGACG
CGGCTGGCGA TGCTCGATCG TCCTGTGGAC GACGTCGGGT TGAACGTCGC TGAACACCAC
AAACGCCAGG CTTTCATCAG TCAGCTGTTC GCTGATCTGG CGAAGGATCC GGCGGTACGC
GTCATCGATC CGGCGCCGAA GCTGTGCGAT GAGAGCGGTC TTTGCCGTGC AGAGCTCGGT
GGTTACTCGC TGTACACCGA TGACAATCAC CTGTCGGAGG TCGGCGCACG TTTCGTGGCA
CCGATCCTCG AACCCTTGTT TGTTAGCCTG CAGGCCAGGA CAAATCTTGG AAAAGGTCAG
GCGAATGCAG CCAAGTAA
|
|---|
| Protein sequence | MSTLAYRRDI DGLRAVAVIA VVLFHFGVPG FTGGFVGVDV FFVISGYLIT SIIWNQRQTG
RFSFVEFWLR RARRILPALF AMIIAVLAVG WFLMAPKDYE ELGRSVRYQV MFVSNILFMR
QDGYFDVASD LKPLLHTWSL AVEEQFYIVF PLLLTLMSSR LKHWRLALFG VLLVSFGLSV
WAVHQHPEKA FFLLPMRAWE LLAGAMLAIA PMHGWRLKPM AAQFLSLLGM GLILLAVFGF
DKRTPFPGAA ALLPVLGVVL LILANGHRQT WVGQFLSSRA MVGLGLISYS WYLWHWPVFV
FSSYASVEEP GAFDSAGMIL LTLVLGYLSW KLIETPFRER RVLAGRRQIL LAGACGVLVL
GLAGQTLRWT DGLPWRLSDQ ALQYAKGREW RPELMACLAD DKTPDDKLFC HYGLQNRASR
ALVWGDSHAT ALIPVFDDGA KAHGVSVMLA SSPGCIPVEG LEHDARCARF NQRVVQAIKP
QAVSDVVLVA RWSLYLYGDA KGDLGHVLRT PDGQYDRAVA EQRLTDGLRA RVAQLRAGGH
RVWLVKEAPL QDFSPPYRLT RLAMLDRPVD DVGLNVAEHH KRQAFISQLF ADLAKDPAVR
VIDPAPKLCD ESGLCRAELG GYSLYTDDNH LSEVGARFVA PILEPLFVSL QARTNLGKGQ
ANAAK
|
|---|
| |