Gene Pfl01_5453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5453 
Symbol 
ID3714069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6118523 
End bp6119491 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_351181 
Protein GI77461674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00193598 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTGTAA CCCTGCAGCC CTCCGGAGCG GTGCTCGAGA TACAGCCCGG AGAGCGGATT 
CTCGATGGCG CGCGGCGCCT GGGCTACGAA TGCCCGCGAA GCTGCCGCAA TGGCAATTGC
CATGTGTGTG CGGCACTGCT GGTGGAAGGC CGGGTCGAAC AGGCCGGCAA GGTGCACGAC
CACGGCGAGT TCTACACTTG CATAGCGGAG CCGCTGGAAG ACTGCATCGT GCTGTGGGAT
GGCGTGCTCG CGCTGGGAGA ACTGCCCGTG CGCAGCGTGT CGTGTCAGGT CATCGAATGC
CGGGACGTCG GTGGCGATAC CTTTCGTGTG CGCCTGCGGG CACCGGCCGG CAAGCCGCCG
CGCTATCACG CCGGTCAGTA TTTGATGATC GAGCGCGAGA ATGGCGAGAA ATCGGCGTTC
TCCATGGCTT CGGCGCCTCA CGGCGGGCGC GATCTGGAAA TCCATGTGCT GGCGCGCGAA
TCCAGTGCGC TGAGCCTGAT CGATCAGCTC AGGCGCAACT CGATGGTGCG GGTCGAACTG
CCGTTCGGCG ATACCCACCT GGCGGAACTG CCGGACGGGC CGCTGGTGCT GATCGCCGCT
GGTACTGGCA TGGGCCAGAT CCACAGCCTG ATCGAGCATT GCCGGGCCAC GGGCTTCAAA
CACCCGGTGC ATCTGTATTG GGGCGTGCGT CGTCCGGAAG ATTTTTATGA AATCGAGCAT
TGGGACGAAT GGCTGAAGTT GCCCAATCTG TTCCTGCACA AAGTGGTCAG TGACCAGTGC
GGCTGGGAGG GGCGCTGCGG CATGTTGCAC GAAGCGGTAT GTGAGGATTT CCCTGATCTG
AAATCGCTGC ACGTCTATGC CAGTGGCTCT CCGGCCATGG TCTACGGCAC GCTGGATGCG
CTGGTCGAAG CCGGGATGGA TGCCCATCAG ATGCGTGCGG ATGTATTTGC TTACGCACCC
CGCTCCTGA
 
Protein sequence
MRVTLQPSGA VLEIQPGERI LDGARRLGYE CPRSCRNGNC HVCAALLVEG RVEQAGKVHD 
HGEFYTCIAE PLEDCIVLWD GVLALGELPV RSVSCQVIEC RDVGGDTFRV RLRAPAGKPP
RYHAGQYLMI ERENGEKSAF SMASAPHGGR DLEIHVLARE SSALSLIDQL RRNSMVRVEL
PFGDTHLAEL PDGPLVLIAA GTGMGQIHSL IEHCRATGFK HPVHLYWGVR RPEDFYEIEH
WDEWLKLPNL FLHKVVSDQC GWEGRCGMLH EAVCEDFPDL KSLHVYASGS PAMVYGTLDA
LVEAGMDAHQ MRADVFAYAP RS