Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5453 |
Symbol | |
ID | 3714069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6118523 |
End bp | 6119491 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | CDP-6-deoxy-delta-3,4-glucoseen reductase |
Protein accession | YP_351181 |
Protein GI | 77461674 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00193598 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGTGTAA CCCTGCAGCC CTCCGGAGCG GTGCTCGAGA TACAGCCCGG AGAGCGGATT CTCGATGGCG CGCGGCGCCT GGGCTACGAA TGCCCGCGAA GCTGCCGCAA TGGCAATTGC CATGTGTGTG CGGCACTGCT GGTGGAAGGC CGGGTCGAAC AGGCCGGCAA GGTGCACGAC CACGGCGAGT TCTACACTTG CATAGCGGAG CCGCTGGAAG ACTGCATCGT GCTGTGGGAT GGCGTGCTCG CGCTGGGAGA ACTGCCCGTG CGCAGCGTGT CGTGTCAGGT CATCGAATGC CGGGACGTCG GTGGCGATAC CTTTCGTGTG CGCCTGCGGG CACCGGCCGG CAAGCCGCCG CGCTATCACG CCGGTCAGTA TTTGATGATC GAGCGCGAGA ATGGCGAGAA ATCGGCGTTC TCCATGGCTT CGGCGCCTCA CGGCGGGCGC GATCTGGAAA TCCATGTGCT GGCGCGCGAA TCCAGTGCGC TGAGCCTGAT CGATCAGCTC AGGCGCAACT CGATGGTGCG GGTCGAACTG CCGTTCGGCG ATACCCACCT GGCGGAACTG CCGGACGGGC CGCTGGTGCT GATCGCCGCT GGTACTGGCA TGGGCCAGAT CCACAGCCTG ATCGAGCATT GCCGGGCCAC GGGCTTCAAA CACCCGGTGC ATCTGTATTG GGGCGTGCGT CGTCCGGAAG ATTTTTATGA AATCGAGCAT TGGGACGAAT GGCTGAAGTT GCCCAATCTG TTCCTGCACA AAGTGGTCAG TGACCAGTGC GGCTGGGAGG GGCGCTGCGG CATGTTGCAC GAAGCGGTAT GTGAGGATTT CCCTGATCTG AAATCGCTGC ACGTCTATGC CAGTGGCTCT CCGGCCATGG TCTACGGCAC GCTGGATGCG CTGGTCGAAG CCGGGATGGA TGCCCATCAG ATGCGTGCGG ATGTATTTGC TTACGCACCC CGCTCCTGA
|
Protein sequence | MRVTLQPSGA VLEIQPGERI LDGARRLGYE CPRSCRNGNC HVCAALLVEG RVEQAGKVHD HGEFYTCIAE PLEDCIVLWD GVLALGELPV RSVSCQVIEC RDVGGDTFRV RLRAPAGKPP RYHAGQYLMI ERENGEKSAF SMASAPHGGR DLEIHVLARE SSALSLIDQL RRNSMVRVEL PFGDTHLAEL PDGPLVLIAA GTGMGQIHSL IEHCRATGFK HPVHLYWGVR RPEDFYEIEH WDEWLKLPNL FLHKVVSDQC GWEGRCGMLH EAVCEDFPDL KSLHVYASGS PAMVYGTLDA LVEAGMDAHQ MRADVFAYAP RS
|
| |