Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5452 |
Symbol | |
ID | 3714068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6117657 |
End bp | 6118325 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ChaC-like protein |
Protein accession | YP_351180 |
Protein GI | 77461673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00716931 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGCCA TTGAAAACGC TTTTCTGAAC CTGGCTTACC CTCCGCGGCT CGATCTTGGG CCGCAGCTGA CGCACGAACA ACTTCTCGCT TCCATGCAAT CGACCATGGC ACGCCACAAG GGCGGGCCGG TGTGGCTGTT CGCCTACGGT TCGCTGATCT GGCGGCCGGA ATGCACAGCC GTCGAGCGGG TGCGTGGGCG CGTGCATGGC TATCACCGTG GCTTGTACTT GTGGTCTCAC GAGCATCGCG GCACGCCGGA AATGCCGGGT CTGGTCTTTG GTCTGGACCG TGGCGGTTCG TGCAGCGGCT TCGCCTATCG GTTGCCGGAA GAGAACCTGG ACCGCGCGCT GTATGCATTG TGGAAACGCG AAATGCCGTT CCCGTCCTAT CGGCCACACT GGCTCAACTG CCGACTCGAA GATGGCAGCC AGGTTCAGGC CTTGGGATTC GTATTGGAGC GACACCTGCC CAGCTATGCC GGCAACTTGC CGGATCATGT GCTGAGCCAG GTGTTCGAAA GCGCTTGCGG ACGTTACGGC ACTACTCGCG ATTATGTCGA GCAGACCGCT CACGCCCTGC GCAGCCACGC CATGCCAGAC CGGAATCTGG AGGCGCGGCT CAAGCGCTGT AAGTCAAAGG CCGATCAGGC GACCGCTTCA CGGCTCTGA
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Protein sequence | MSAIENAFLN LAYPPRLDLG PQLTHEQLLA SMQSTMARHK GGPVWLFAYG SLIWRPECTA VERVRGRVHG YHRGLYLWSH EHRGTPEMPG LVFGLDRGGS CSGFAYRLPE ENLDRALYAL WKREMPFPSY RPHWLNCRLE DGSQVQALGF VLERHLPSYA GNLPDHVLSQ VFESACGRYG TTRDYVEQTA HALRSHAMPD RNLEARLKRC KSKADQATAS RL
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