Gene Pfl01_5452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5452 
Symbol 
ID3714068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6117657 
End bp6118325 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID 
ProductChaC-like protein 
Protein accessionYP_351180 
Protein GI77461673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00716931 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCCA TTGAAAACGC TTTTCTGAAC CTGGCTTACC CTCCGCGGCT CGATCTTGGG 
CCGCAGCTGA CGCACGAACA ACTTCTCGCT TCCATGCAAT CGACCATGGC ACGCCACAAG
GGCGGGCCGG TGTGGCTGTT CGCCTACGGT TCGCTGATCT GGCGGCCGGA ATGCACAGCC
GTCGAGCGGG TGCGTGGGCG CGTGCATGGC TATCACCGTG GCTTGTACTT GTGGTCTCAC
GAGCATCGCG GCACGCCGGA AATGCCGGGT CTGGTCTTTG GTCTGGACCG TGGCGGTTCG
TGCAGCGGCT TCGCCTATCG GTTGCCGGAA GAGAACCTGG ACCGCGCGCT GTATGCATTG
TGGAAACGCG AAATGCCGTT CCCGTCCTAT CGGCCACACT GGCTCAACTG CCGACTCGAA
GATGGCAGCC AGGTTCAGGC CTTGGGATTC GTATTGGAGC GACACCTGCC CAGCTATGCC
GGCAACTTGC CGGATCATGT GCTGAGCCAG GTGTTCGAAA GCGCTTGCGG ACGTTACGGC
ACTACTCGCG ATTATGTCGA GCAGACCGCT CACGCCCTGC GCAGCCACGC CATGCCAGAC
CGGAATCTGG AGGCGCGGCT CAAGCGCTGT AAGTCAAAGG CCGATCAGGC GACCGCTTCA
CGGCTCTGA
 
Protein sequence
MSAIENAFLN LAYPPRLDLG PQLTHEQLLA SMQSTMARHK GGPVWLFAYG SLIWRPECTA 
VERVRGRVHG YHRGLYLWSH EHRGTPEMPG LVFGLDRGGS CSGFAYRLPE ENLDRALYAL
WKREMPFPSY RPHWLNCRLE DGSQVQALGF VLERHLPSYA GNLPDHVLSQ VFESACGRYG
TTRDYVEQTA HALRSHAMPD RNLEARLKRC KSKADQATAS RL