Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5443 |
Symbol | |
ID | 3714347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6109840 |
End bp | 6110958 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351171 |
Protein GI | 77461664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00889571 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACAAAC TCGTACACAT CCTGCGATTG GGTCTCAAGG AACTGACGAG CCTGCGCCAT GACAGCGTGT TACTGCTGTT CCTGTTCTAC GCCTTCACCG TGGCCATCTA TATGCCAGCC GCCGGTTCAG TGATCGGCGT GCATAACGCC AGCGTGGCGA TTGTCGACGA GGATCACAGC GCCCTTTCGC GCCAATTGGC CGAGGCGCTG CAGCCTCCGG AATTCCAGAC GCCGGTAACG CTGCCCTACG AGCAACTGGA TGAAGTCATG GACAGCGGCC GATACACGTT CGTCATCAAC ATCCCCGCCG GTTTTCAGAC AGACCTGCTC GCGGGTCGCC GGCCAGCCCT GCAAGTCAAC GTCGACGCCA CCGCCATGAG CCAGGCTTTC ATGGGCGCCG GCTACATCAG CCGAATATTT CAGCGTGAAT TATTGGCATA TTCAGGCCAG GGTGATGTGC AGACCGGGTC TGCGGTACAA CTGACGACTC GAGCCCTGTT CAATACCAAT CTTGAGGGCG GCTGGTTTCT GGCCGTGATT CAGATCGTCA ACAACATCAC CATTCTGGCG ATCATTCTGA CCGGCACCGC GCTCCTGCGC GAGCGCGAAC ACGGCACCCT GGATCATTTG CTGGTGCTGC CACTGACCGC ACTGGAAATC ATGCTGGCGA AAGTCTGGAG CAATCTGCTG GTGGTGGTGC TATGCACCTG GCTGTCACTG GAAGTGGTTG TCAAAGGTGC GTTGGGCGTA CCTTTATCCG GCTCATTGAG CCTGTTTTTG CTGGTCACGG CCGTTTATCT GTTCGCCAGC ACCGCGCTGG GTATCTTCCT GGCAACGCTG GCGCGTTCGA CACCGCAGTT CGGCCTGCTG GCCATCCCGG TGATTATCCC GATGCTGCTG TTGTCGGGCG GCAGCACACC GCTGGACAGC ATGCCGCAGT GGTTGCAATG GGTCATGCAA GGGTCACCGT CCACCCACTT CGTCAGCCTC GGCACCGCGA TCCTGTTTCG CGACGCCGGG CTGAGCGTAG TGTGGCCTGA TTTGATGGCG CTGGTCGTGA TCGGTTTACT GTTCTTTTTC ATCGCCCTGG CACGGTTTCG CAAGAGCCTG GCGTCGTGA
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Protein sequence | MHKLVHILRL GLKELTSLRH DSVLLLFLFY AFTVAIYMPA AGSVIGVHNA SVAIVDEDHS ALSRQLAEAL QPPEFQTPVT LPYEQLDEVM DSGRYTFVIN IPAGFQTDLL AGRRPALQVN VDATAMSQAF MGAGYISRIF QRELLAYSGQ GDVQTGSAVQ LTTRALFNTN LEGGWFLAVI QIVNNITILA IILTGTALLR EREHGTLDHL LVLPLTALEI MLAKVWSNLL VVVLCTWLSL EVVVKGALGV PLSGSLSLFL LVTAVYLFAS TALGIFLATL ARSTPQFGLL AIPVIIPMLL LSGGSTPLDS MPQWLQWVMQ GSPSTHFVSL GTAILFRDAG LSVVWPDLMA LVVIGLLFFF IALARFRKSL AS
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