Gene Pfl01_5443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5443 
Symbol 
ID3714347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6109840 
End bp6110958 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351171 
Protein GI77461664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00889571 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACAAAC TCGTACACAT CCTGCGATTG GGTCTCAAGG AACTGACGAG CCTGCGCCAT 
GACAGCGTGT TACTGCTGTT CCTGTTCTAC GCCTTCACCG TGGCCATCTA TATGCCAGCC
GCCGGTTCAG TGATCGGCGT GCATAACGCC AGCGTGGCGA TTGTCGACGA GGATCACAGC
GCCCTTTCGC GCCAATTGGC CGAGGCGCTG CAGCCTCCGG AATTCCAGAC GCCGGTAACG
CTGCCCTACG AGCAACTGGA TGAAGTCATG GACAGCGGCC GATACACGTT CGTCATCAAC
ATCCCCGCCG GTTTTCAGAC AGACCTGCTC GCGGGTCGCC GGCCAGCCCT GCAAGTCAAC
GTCGACGCCA CCGCCATGAG CCAGGCTTTC ATGGGCGCCG GCTACATCAG CCGAATATTT
CAGCGTGAAT TATTGGCATA TTCAGGCCAG GGTGATGTGC AGACCGGGTC TGCGGTACAA
CTGACGACTC GAGCCCTGTT CAATACCAAT CTTGAGGGCG GCTGGTTTCT GGCCGTGATT
CAGATCGTCA ACAACATCAC CATTCTGGCG ATCATTCTGA CCGGCACCGC GCTCCTGCGC
GAGCGCGAAC ACGGCACCCT GGATCATTTG CTGGTGCTGC CACTGACCGC ACTGGAAATC
ATGCTGGCGA AAGTCTGGAG CAATCTGCTG GTGGTGGTGC TATGCACCTG GCTGTCACTG
GAAGTGGTTG TCAAAGGTGC GTTGGGCGTA CCTTTATCCG GCTCATTGAG CCTGTTTTTG
CTGGTCACGG CCGTTTATCT GTTCGCCAGC ACCGCGCTGG GTATCTTCCT GGCAACGCTG
GCGCGTTCGA CACCGCAGTT CGGCCTGCTG GCCATCCCGG TGATTATCCC GATGCTGCTG
TTGTCGGGCG GCAGCACACC GCTGGACAGC ATGCCGCAGT GGTTGCAATG GGTCATGCAA
GGGTCACCGT CCACCCACTT CGTCAGCCTC GGCACCGCGA TCCTGTTTCG CGACGCCGGG
CTGAGCGTAG TGTGGCCTGA TTTGATGGCG CTGGTCGTGA TCGGTTTACT GTTCTTTTTC
ATCGCCCTGG CACGGTTTCG CAAGAGCCTG GCGTCGTGA
 
Protein sequence
MHKLVHILRL GLKELTSLRH DSVLLLFLFY AFTVAIYMPA AGSVIGVHNA SVAIVDEDHS 
ALSRQLAEAL QPPEFQTPVT LPYEQLDEVM DSGRYTFVIN IPAGFQTDLL AGRRPALQVN
VDATAMSQAF MGAGYISRIF QRELLAYSGQ GDVQTGSAVQ LTTRALFNTN LEGGWFLAVI
QIVNNITILA IILTGTALLR EREHGTLDHL LVLPLTALEI MLAKVWSNLL VVVLCTWLSL
EVVVKGALGV PLSGSLSLFL LVTAVYLFAS TALGIFLATL ARSTPQFGLL AIPVIIPMLL
LSGGSTPLDS MPQWLQWVMQ GSPSTHFVSL GTAILFRDAG LSVVWPDLMA LVVIGLLFFF
IALARFRKSL AS