Gene Pfl01_5432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5432 
Symbol 
ID3714336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6100068 
End bp6100553 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351160 
Protein GI77461653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0260977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGT GGCTGATCAG ACGGTTTGGC AAGGCGCGGC TGATGCGCTG GATCATGACG 
CTCTACCCGC CGTACTTCGG CGCCGGTGTC CGGGTGCAGC ACATCAGCGA TGACTTTCGT
GACATCCAGG TCTCGATGGG CCTGGGCTGG TACAACCGCA ATTACGTCGG CACCCAGTTC
GGCGGCAGTC TGTATTCGAT GGTCGATCCG TTCTTCATGT TGATGCTCAT GGAAAACCTC
GGCTCGAAGT ACATCGTCTG GGACAAGGCC GCCGACATTG ATTTCATCTC GCCGGGCAAA
GGCCCGGTGT TCGCCCGGTT CAACATCGAC GACACCCTGC TCGACGAGAT CCGCCGGCAG
ACCGCCAGTG GCGAGAAATA CCTGCCGCAG TTGCAGGTCG ACATTCATGA CGGCGCCGGC
AACCTGGTGG CGCGGGTCGG TAAAACCCTT TACGTGCGGC TCAAGCCGCC AGCGAGACAG
GCTTAA
 
Protein sequence
MREWLIRRFG KARLMRWIMT LYPPYFGAGV RVQHISDDFR DIQVSMGLGW YNRNYVGTQF 
GGSLYSMVDP FFMLMLMENL GSKYIVWDKA ADIDFISPGK GPVFARFNID DTLLDEIRRQ
TASGEKYLPQ LQVDIHDGAG NLVARVGKTL YVRLKPPARQ A