| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5424 |
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| Symbol | |
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| ID | 3714446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 6089033 |
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| End bp | 6090817 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_351152 |
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| Protein GI | 77461645 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.166442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0300946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTC AACTCGCCAC TCAGGATCGC TGGCTGGATC TCAATGAGGT ACTGCGTGAA
CTGGTCGCCC AAGGGTTCAT CTGCCAGGAC TCGGCCGAGC AGGCGCTAAA TGCCCGGCGT
CGGCATGCCG CCCACGGCCA GAAGCATCCG CTGGAATTCA TCGCCAGCCA GCAACTGGAC
GATCTCAGCC GTCCGGGCAA ACACCTCGAC CTGGAAAGCC TGACCCTGTG GCTGGCGCAG
CAGGCCGGCC AGCCGTACCT GCGGATCGAT CCGCTGAAGA TCAACGTCGC CGCCGTCACG
CCGCTGATGT CCTACGCCTT TGCCCAGCGC CACAAGATTC TCGCGGTGTC GGTCGACCGC
GACGCGGTCA CCGTGGCCAG CGCCCAGCCC TACGTCAGCG GCTGGGAGGC GGATCTGACT
CACGTCCTGA AACTGCCGAT CAAACGGGTG GTGGCCAACC CGGCGGACAT TCAGCGTTTC
AGCGTGGAAT TCTTTCGCCT CGCCAAATCG GTCAGCGGCG CCAGCAATGC CGATGCGCAG
AGCGGCAACC TCGGCAACTT CGAACAGTTG CTCAACCTCG GCGCCAGCGA TCAGGAGCCC
GACGCCAACG ACGCGCACAT CGTCAACATC GTCGACTGGC TGTTCCAGTA CGCCTTCCAG
CAACGGGCCA GCGATATCCA CATCGAACCC CGGCGCGAGC AAGGCACGGT GCGTTTTCGC
ATCGACGGCG TGCTGCACAA CGTCTATCAA TTCCCGCCGC AGGTGACGAT GGCCATCGTC
AGCCGCCTGA AAAGCCTTGG CCGGATGAAC GTCGCCGAGA AACGCAAACC CCAGGACGGC
CGGGTCAAGA CCAAGACCCC GGACGGCGGT GAAGTCGAGT TGCGGCTGTC GACCCTGCCC
ACCGCATTCG GCGAAAAAAT GGTGATGCGG ATCTTCGACC CGGAAGTCCT GCTCAAGGAT
TTCGATCAAC TGGGGTTTTC CACCGACGAC CTGCGGCGCT GGCAGGACAT GACCCGCCAG
CCCAACGGTA TCATCCTGGT CACCGGGCCG ACCGGTTCCG GCAAGACCAC CACGCTGTAC
ACCACGCTGA AAAAACTGGC GACCCCGGAG GTCAACCTCT GCACCATTGA GGACCCGATC
GAGATGGTCG AGCCGGCCTT CAACCAGATG CAGGTCCAGC ACAACATCGA CCTGACCTTC
GCCGCCGGCG TGCGTGCGCT GATGCGGCAG GACCCGGACA TCATCATGAT CGGCGAAATC
CGCGATCTGG AAACGGCCGA AATGGCGATC CAGGCGGCGC TGACCGGGCA CCTGGTGCTC
TCGACCCTGC ACACCAACGA CGCGCCGAGC GCCATCAGCC GCCTGCTGGA ACTCGGCGTG
CCGCATTACC TGATCAAGGC CACCGTGCTC GGTGTGATGG CGCAACGACT GGTGCGAACC
CTTTGCCCGC ACTGCAAGGC GCCGCTGACG CTGGACGAAG AAGACTGGCA AACCCTGACC
CGGCCGTGGC AGGCGCCGCT GCCGGGCAAT GCGCAACGGG CCATCGGTTG CCTGGAGTGC
CGCGACACCG GTTATCACGG GCGTGCCGGG GTCTACGAAA TCATGCAACT GAGCGACAGC
CTCAAGGCCT TGATCAGCCC CGACACCGAT CTCACCGCGA TCCGCCGGCA GGCGTTCAAG
GAAGGCATGC GCAGCCTGCG CTTGTCCGGC GCGCAGAAAG TCGCGGCCGG GCTGACGACG
CTTGAGGAAG TGCTGCGGGT GACACCACAG AGCGAGCAGA AATAA
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| Protein sequence | MSVQLATQDR WLDLNEVLRE LVAQGFICQD SAEQALNARR RHAAHGQKHP LEFIASQQLD
DLSRPGKHLD LESLTLWLAQ QAGQPYLRID PLKINVAAVT PLMSYAFAQR HKILAVSVDR
DAVTVASAQP YVSGWEADLT HVLKLPIKRV VANPADIQRF SVEFFRLAKS VSGASNADAQ
SGNLGNFEQL LNLGASDQEP DANDAHIVNI VDWLFQYAFQ QRASDIHIEP RREQGTVRFR
IDGVLHNVYQ FPPQVTMAIV SRLKSLGRMN VAEKRKPQDG RVKTKTPDGG EVELRLSTLP
TAFGEKMVMR IFDPEVLLKD FDQLGFSTDD LRRWQDMTRQ PNGIILVTGP TGSGKTTTLY
TTLKKLATPE VNLCTIEDPI EMVEPAFNQM QVQHNIDLTF AAGVRALMRQ DPDIIMIGEI
RDLETAEMAI QAALTGHLVL STLHTNDAPS AISRLLELGV PHYLIKATVL GVMAQRLVRT
LCPHCKAPLT LDEEDWQTLT RPWQAPLPGN AQRAIGCLEC RDTGYHGRAG VYEIMQLSDS
LKALISPDTD LTAIRRQAFK EGMRSLRLSG AQKVAAGLTT LEEVLRVTPQ SEQK
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