Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5420 |
Symbol | |
ID | 3714442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6085292 |
End bp | 6086440 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | acetylornithine deacetylase |
Protein accession | YP_351148 |
Protein GI | 77461641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0300946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGC CGTCCATGCA AGACCAGTTC GCTGCACTGA TCGCAGCGCC GTCGGTCAGC TGCACCCAGC CGGGCCTCGA CCAGTCCAAC CGGGCGGTGA TCGATCTGCT TGCGGGCTGG CTCGGCGACC TCGGCTTCAG CTGCGACATC CAGCAGGTCA GTCCCGGCAA ATTCAATCTG CTCGCCAGTT TCGGCAGTGG CCCCGGCGGG CTGGTGCTGG CCGGGCACAG CGACACGGTG CCCTACGACG ATGCGTTGTG GAAAACCGAT CCGCTGAAAC TCACCGAAGT CGATGGCCGC TGGGTCGGTC TCGGCAGTTG CGACATGAAG GGCTTCTTCG CCCTGATCAT CGAAGCCGTG CAACCGCTGC TCGCTCAACC GTTCAAGCAG CCGCTGCTGA TCCTCGCCAC CTGCGATGAA GAAAGCTCGA TGTCCGGTGC CCGGGCGCTG GCCGAAGCGG GGCGCCCGCT GGGCCGGGCG GCCGTGATCG GCGAGCCGAC CGGGCTCAAG CCGATCCGCA TGCACAAGGG CATCATGATG GAGCGCATCG ATATCCTCGG GCAGAGCGGC CATTCGTCGG ATCCGCGCCT GGGGCACAGC GCCCTCGAAG CGATGCACGA TGCCATCGGC GAACTGCGCG GCCTGCGCCT GTTGTGGCAG CGTGAATTCA ACAACCCGCA GTTCAGCGTG CCGCAGCCGA CCATGAACTT CGGCTGTATC CACGGTGGCG ACAACCCCAA CCGTATCTGC GGCCAGTGTT CACTGGAGTT CGACCTGCGG CCGTTGCCGG GGATGGACCC GAAAATCTTG CGCAGCGAGA TTCTGCGCAA GCTCAACCCG GTCGCCGAAC GGCATAAAGT GAAGATCGAT TACGCGCCGC TGTTTCCCGA AGTGCCGCCG TTCGAGCAGG CCGAAGACGC GGAGCTGGTG CGAATTGCCG AAAAACTCAC CGGCCACACG GCCGAAGCGG TAGCGTTCGG CACCGAAGCG CCTTATCTTC AGCGCCTTGG CTGCGAAACC ATCGTGCTCG GCCCCGGCGA CATCGCCTGT GCGCACCAGC CGGACGAGTA CCTCGAAATG TCACGTTTGC AGCCTACCGT GCATCTATTG CGGCAGTTGA TCGAACATTA CTGTCTCAAA ACTGTATAA
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Protein sequence | MPLPSMQDQF AALIAAPSVS CTQPGLDQSN RAVIDLLAGW LGDLGFSCDI QQVSPGKFNL LASFGSGPGG LVLAGHSDTV PYDDALWKTD PLKLTEVDGR WVGLGSCDMK GFFALIIEAV QPLLAQPFKQ PLLILATCDE ESSMSGARAL AEAGRPLGRA AVIGEPTGLK PIRMHKGIMM ERIDILGQSG HSSDPRLGHS ALEAMHDAIG ELRGLRLLWQ REFNNPQFSV PQPTMNFGCI HGGDNPNRIC GQCSLEFDLR PLPGMDPKIL RSEILRKLNP VAERHKVKID YAPLFPEVPP FEQAEDAELV RIAEKLTGHT AEAVAFGTEA PYLQRLGCET IVLGPGDIAC AHQPDEYLEM SRLQPTVHLL RQLIEHYCLK TV
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