Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5419 |
Symbol | |
ID | 3714441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6083858 |
End bp | 6085156 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | N-acetylglutamate synthase |
Protein accession | YP_351147 |
Protein GI | 77461640 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0279561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAAT ACGTCAATTG GCTTCGCCAC GCGTCTCCTT ATATCAATGC TCACCGCGAT TGCACCTTCG TCGTCATGCT TCCGGGCGAC GGCGTCGAGC ATCCGAATTT CGGCAACATC GTCCATGACA TCGTATTGCT GCACAGCCTC GGCGTGCGGC TGGTGCTGGT TCACGGTTCC CGTCCTCAGA TCGAAACTCG CCTTGCCGCC CGTGGCCTGA CCCCGCATTA CCACCACGGC ATGCGCATCA CCGATGCCGC GACGCTGGAG TGCGTGATCG ATGCGGTCGG CCAGTTGCGC ATCGCCATCG AAGCGCGATT GTCGATGGAC ATGGCCTCGT CGCCGATGCA GGGCTCGCGT CTGCGGGTGG CCAGCGGCAA CCTCGTGACG GCCCGGCCGA TCGGCGTGCT GGAAGGTGTC GACTATCACC ACACCGGCGA AGTGCGCCGG GTCGACCGCA AAGGCATCAA CCGTCTGCTC GACGAGCGCT CCATCGTGCT GCTGTCGCCG CTGGGTTATT CGCCGACCGG CGAGATCTTC AACCTGGCCT GCGAAGACGT CGCCACCCGT GCCGCCATCG ATCTGGGCGC CGACAAGCTG CTGCTGTTCG GCGCCGACCT CGGTCTGATC GACGAAAACG GCAAACTGGT GCGCGAACTG CGTCCGCAAC AGGTGCCGGC ACATCTGCAG CGTCTGGGCA GCAACTATCA GGCGGAACTG CTGGATGCCG CCGCCGAAGC CTGTCGTGGC GGCGTGGCAC GCAGCCATAT CGTCAGTTAT GCCGAGGATG GTGCGCTGCT GACCGAACTG TTCACCCGTG ACGGTGGCGG TACGCTGGTG GCCCAGGAGC AATTCGAACT GGTGCGCGAG GCGGCGATTG AAGACGTCGG TGGCTTGCTT GACCTGATCA GTCCGCTGGA AGAGCAGGGG ATTCTGGTGC GTCGCTCGCG CGAAGTGCTG GAGCGTGAGA TCGAGCAGTT CAGTGTGGTC GAGCGTGAAG GGATGATCAT CGCCTGTGCG GCGCTGTATC AGATTGCCGA TTCGGATGCC GGTGAACTGG CGTGCCTGGC GGTGAATCCC GAGTATCGCC ATGGCGGTCG CGGCGACGAA TTGCTCGAGC GCATCGAGAC CCGTGCCCGG GCGCAGGGCC TGAAGACTTT GTTCGTCCTC ACCACCCGCA CTGCCCACTG GTTCCGCGAG CGCGGTTTCG AGCCGAGCAG CGTTGAACGC CTGCCGGCGG CGCGGGCTTC TCTCTATAAC TATCAGCGCA ATTCAAAGAT CTTCGAAAAG TCTCTGTGA
|
Protein sequence | MPEYVNWLRH ASPYINAHRD CTFVVMLPGD GVEHPNFGNI VHDIVLLHSL GVRLVLVHGS RPQIETRLAA RGLTPHYHHG MRITDAATLE CVIDAVGQLR IAIEARLSMD MASSPMQGSR LRVASGNLVT ARPIGVLEGV DYHHTGEVRR VDRKGINRLL DERSIVLLSP LGYSPTGEIF NLACEDVATR AAIDLGADKL LLFGADLGLI DENGKLVREL RPQQVPAHLQ RLGSNYQAEL LDAAAEACRG GVARSHIVSY AEDGALLTEL FTRDGGGTLV AQEQFELVRE AAIEDVGGLL DLISPLEEQG ILVRRSREVL EREIEQFSVV EREGMIIACA ALYQIADSDA GELACLAVNP EYRHGGRGDE LLERIETRAR AQGLKTLFVL TTRTAHWFRE RGFEPSSVER LPAARASLYN YQRNSKIFEK SL
|
| |