Gene Pfl01_5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5406 
Symbol 
ID3714428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6069515 
End bp6070879 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative aminotransferase 
Protein accessionYP_351134 
Protein GI77461627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00027228 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAGCA ACAACCCGCA AACCCGTGAG TGGCAAGCCC TCAGCAGCGA TCACCACCTG 
GCTCCGTTCA GCGACTTCAA GCAGCTGAAA GAAAAAGGTC CACGGATCAT CACCAACGCC
AAGGGCGTGT ACCTGTGGGA CAGCGAGGGC AACAAGATCC TCGATGGCAT GGCGGGTCTG
TGGTGTGTGG CGATCGGTTA TGGACGCGAC GAGCTGGCCG ATGCGGCCGC CAAGCAGATG
CGCGAACTGC CTTACTACAA CCTGTTCTTC CAGACCGCCC ACCCGCCAGC ACTGGAGTTG
GCCAAGGCCA TCGCCGACGT GGCGCCGGAA GGCATGAACC ACGTGTTCTT CACCGGCTCC
GGCTCCGAAG GCAACGACAC CATGCTGCGT ATGGTTCGCC ACTACTGGGC GATCAAGGGC
CAGCCGAACA AGAAGGTCAT CATCAGCCGC AAGAACGGCT ACCACGGTTC CACCGTGGCC
GGCGCAAGCC TGGGCGGCAT GACTTACATG CACGAACAGG GCGACCTGCC GATTCCGGGC
ATCGTCCACA TCGCCCAGCC GTACTGGTTC GCCGAAGGCG GCGACATGAC CCCGGAAGAG
TTCGGGATCT GGGCGGCCAA TCAGCTGGAG GAAAAGATTC TGGAAGTCGG CGTGGATAAC
GTCGGTGCCT TTATTGCCGA GCCGATCCAG GGCGCTGGCG GCGTGATCAT TCCGCCGGAC
ACCTACTGGC CGCGCATCAA GGAAATCCTC GCCAAGTACG ACATTCTGTT CGTGGCCGAT
GAAGTGATCT GCGGTTTCGG CCGTACCGGC CAATGGTTCG GCAGCGATTT CTACGACCTC
AAACCACACA TGATGACCAT CGCCAAAGGC CTGACGTCCG GCTACATCCC GATGGGTGGC
CTGATCGTGC GCGATGAAGT GGTGGCGGTA CTCAACGAGG GCGGCGATTT CAACCACGGC
TTCACCTACT CCGGTCACCC GGTGGCGGCG GCGGTGGGTC TGGAAAACAT CCGGATTCTG
CGCGAAGAGA AAATCATCGA ACGCGCCCAT GAAGAAACGG CACCGTATTT GCAGAAACGT
CTGCGCGAAC TGAACGATCA CCCGTTGGTG GGTGAAGTGC GCGGGGTCGG TCTGCTGGGG
GCCATCGAGC TGGTGCAGGA CAAGGCCACT CGCAAGCGTT ACGAAGGCAA GGGTGTGGGC
ATGATCTGCC GCCAGTTCTG CTTCGACAAC GGGCTGATCA TGCGTGCCGT GGGCGACACC
ATGATCATCG CGCCGCCGCT GGTGATCAGC AAGGCGGAGA TCGATGAGCT GGTGACGAAG
GCACGCAAGT GCCTGGACCT GACCCTGAGT GCGTTGCAGG GCTAA
 
Protein sequence
MTSNNPQTRE WQALSSDHHL APFSDFKQLK EKGPRIITNA KGVYLWDSEG NKILDGMAGL 
WCVAIGYGRD ELADAAAKQM RELPYYNLFF QTAHPPALEL AKAIADVAPE GMNHVFFTGS
GSEGNDTMLR MVRHYWAIKG QPNKKVIISR KNGYHGSTVA GASLGGMTYM HEQGDLPIPG
IVHIAQPYWF AEGGDMTPEE FGIWAANQLE EKILEVGVDN VGAFIAEPIQ GAGGVIIPPD
TYWPRIKEIL AKYDILFVAD EVICGFGRTG QWFGSDFYDL KPHMMTIAKG LTSGYIPMGG
LIVRDEVVAV LNEGGDFNHG FTYSGHPVAA AVGLENIRIL REEKIIERAH EETAPYLQKR
LRELNDHPLV GEVRGVGLLG AIELVQDKAT RKRYEGKGVG MICRQFCFDN GLIMRAVGDT
MIIAPPLVIS KAEIDELVTK ARKCLDLTLS ALQG