Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5406 |
Symbol | |
ID | 3714428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6069515 |
End bp | 6070879 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | putative aminotransferase |
Protein accession | YP_351134 |
Protein GI | 77461627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00027228 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCAGCA ACAACCCGCA AACCCGTGAG TGGCAAGCCC TCAGCAGCGA TCACCACCTG GCTCCGTTCA GCGACTTCAA GCAGCTGAAA GAAAAAGGTC CACGGATCAT CACCAACGCC AAGGGCGTGT ACCTGTGGGA CAGCGAGGGC AACAAGATCC TCGATGGCAT GGCGGGTCTG TGGTGTGTGG CGATCGGTTA TGGACGCGAC GAGCTGGCCG ATGCGGCCGC CAAGCAGATG CGCGAACTGC CTTACTACAA CCTGTTCTTC CAGACCGCCC ACCCGCCAGC ACTGGAGTTG GCCAAGGCCA TCGCCGACGT GGCGCCGGAA GGCATGAACC ACGTGTTCTT CACCGGCTCC GGCTCCGAAG GCAACGACAC CATGCTGCGT ATGGTTCGCC ACTACTGGGC GATCAAGGGC CAGCCGAACA AGAAGGTCAT CATCAGCCGC AAGAACGGCT ACCACGGTTC CACCGTGGCC GGCGCAAGCC TGGGCGGCAT GACTTACATG CACGAACAGG GCGACCTGCC GATTCCGGGC ATCGTCCACA TCGCCCAGCC GTACTGGTTC GCCGAAGGCG GCGACATGAC CCCGGAAGAG TTCGGGATCT GGGCGGCCAA TCAGCTGGAG GAAAAGATTC TGGAAGTCGG CGTGGATAAC GTCGGTGCCT TTATTGCCGA GCCGATCCAG GGCGCTGGCG GCGTGATCAT TCCGCCGGAC ACCTACTGGC CGCGCATCAA GGAAATCCTC GCCAAGTACG ACATTCTGTT CGTGGCCGAT GAAGTGATCT GCGGTTTCGG CCGTACCGGC CAATGGTTCG GCAGCGATTT CTACGACCTC AAACCACACA TGATGACCAT CGCCAAAGGC CTGACGTCCG GCTACATCCC GATGGGTGGC CTGATCGTGC GCGATGAAGT GGTGGCGGTA CTCAACGAGG GCGGCGATTT CAACCACGGC TTCACCTACT CCGGTCACCC GGTGGCGGCG GCGGTGGGTC TGGAAAACAT CCGGATTCTG CGCGAAGAGA AAATCATCGA ACGCGCCCAT GAAGAAACGG CACCGTATTT GCAGAAACGT CTGCGCGAAC TGAACGATCA CCCGTTGGTG GGTGAAGTGC GCGGGGTCGG TCTGCTGGGG GCCATCGAGC TGGTGCAGGA CAAGGCCACT CGCAAGCGTT ACGAAGGCAA GGGTGTGGGC ATGATCTGCC GCCAGTTCTG CTTCGACAAC GGGCTGATCA TGCGTGCCGT GGGCGACACC ATGATCATCG CGCCGCCGCT GGTGATCAGC AAGGCGGAGA TCGATGAGCT GGTGACGAAG GCACGCAAGT GCCTGGACCT GACCCTGAGT GCGTTGCAGG GCTAA
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Protein sequence | MTSNNPQTRE WQALSSDHHL APFSDFKQLK EKGPRIITNA KGVYLWDSEG NKILDGMAGL WCVAIGYGRD ELADAAAKQM RELPYYNLFF QTAHPPALEL AKAIADVAPE GMNHVFFTGS GSEGNDTMLR MVRHYWAIKG QPNKKVIISR KNGYHGSTVA GASLGGMTYM HEQGDLPIPG IVHIAQPYWF AEGGDMTPEE FGIWAANQLE EKILEVGVDN VGAFIAEPIQ GAGGVIIPPD TYWPRIKEIL AKYDILFVAD EVICGFGRTG QWFGSDFYDL KPHMMTIAKG LTSGYIPMGG LIVRDEVVAV LNEGGDFNHG FTYSGHPVAA AVGLENIRIL REEKIIERAH EETAPYLQKR LRELNDHPLV GEVRGVGLLG AIELVQDKAT RKRYEGKGVG MICRQFCFDN GLIMRAVGDT MIIAPPLVIS KAEIDELVTK ARKCLDLTLS ALQG
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