| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5401 |
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| Symbol | |
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| ID | 3714755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6063925 |
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| End bp | 6064815 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_351129 |
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| Protein GI | 77461622 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.424261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00155673 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGCT TCCGTTTCTC CAGCCTGATG CTGGTGCTCG GTCTGTTGTT CATCTACCTG
CCGATGCTGA TCCTGGTGAT CTACTCGTTC AACGCCTCAA AACTGGTGAC GGTGTGGGGC
GGCTGGTCGG TGAAGTGGTA CGTCGGCCTG CTCGACAACT CGCAACTGAT GGGCTCGGTG
GTGCGCTCGC TGGAAATCGC CTGCTACACC GCGATTGCCG CGGTGGCGCT GGGTACGCTG
GCAGCCTTCG TGCTGACCCG CATCACCCGC TTCAAGGGCC GCACGCTGTT CGGCGGCCTG
GTCACCGCGC CGCTGGTCAT GCCTGAGGTG ATTACCGGTC TGTCGCTGTT GCTGCTGTTC
GTGGCGATGG CGCAGATGAT CGGCTGGCCG CAGGAGCGTG GCATCGTCAC GATCTGGATC
GCCCACACCA CGTTCTGTGC GGCGTATGTG GCGGTGGTGG TGTCGGCGCG TCTGCGTGAG
CTGGACCTGT CGATCGAAGA AGCGGCGATG GACCTCGGTG CGCGTCCGTG GAAGGTGTTC
TTCCTGATCA CCATCCCGAT GATCGCGCCG TCGCTGGCGG CGGGCGGCAT GATGTCGTTC
GCGCTGTCGC TGGATGACCT GGTATTGGCG AGCTTCGTCT CCGGCCCGGG TTCAACGACC
CTGCCGATGG AAGTGTTCTC GGCGGTGCGT CTGGGCGTGA AGCCTGAGAT CAACGCCGTG
GCCAGCCTGA TTCTGCTGGC GGTGTCGCTG GTGACCTTCC TGGTCTGGTT CTTCAGCCGC
CGTGCCGAAG AAGCCCGCAA GAAAGCGATT CAGCAGGCCA TCGAAGAGGG CGCTGCGGAT
TCGTGGAAGC AACCGGACGT GCGCCGGGCG CCGACGCCGG AAGCGGCTTA A
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| Protein sequence | MKRFRFSSLM LVLGLLFIYL PMLILVIYSF NASKLVTVWG GWSVKWYVGL LDNSQLMGSV
VRSLEIACYT AIAAVALGTL AAFVLTRITR FKGRTLFGGL VTAPLVMPEV ITGLSLLLLF
VAMAQMIGWP QERGIVTIWI AHTTFCAAYV AVVVSARLRE LDLSIEEAAM DLGARPWKVF
FLITIPMIAP SLAAGGMMSF ALSLDDLVLA SFVSGPGSTT LPMEVFSAVR LGVKPEINAV
ASLILLAVSL VTFLVWFFSR RAEEARKKAI QQAIEEGAAD SWKQPDVRRA PTPEAA
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