Gene Pfl01_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5400 
Symbol 
ID3714754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6063195 
End bp6063866 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID 
Productmetal dependent phosphohydrolase 
Protein accessionYP_351128 
Protein GI77461621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.934439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00141947 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGCGT TTTCGACGAG GAAGCTCAAC ATGACCACGA CCATCGCCGG TATCCGGATC 
CCCGACAGCG CCCTCGCCCG GGCCACCACC GAGTACATCC GCGACATCGA ATCCGACCTG
CTTTACCACC ACTCGCGCCG GGTATTTCTG TTCGGCGCCT TGAGCGGTGA GCGTCAGCAA
CTGGCCTACG ATCCGGAGCT GCTGTACGTC GGCGCGATGC TCCACGACCT GGGTCTGGTC
GAAGGGCATC GCAGCGATGA CGAGCGTTTC GAAGTGGATG GCGCCAACGC AGCCGCCGCG
TTTCTAAAAC CGTACGGGTT GAGTGACGAC GACATCGAGC AGGTGTGGCT GTCGATCGCC
CTGCACACCA CGCCGGGGGT GCCGAAGCAT CTGCGTCCGA CCGTGGCGCT GGTGACCGCA
GGCGTCGAGA TGGACGTGCT GGGCATGGAC TACGCGGCAT TCACCACGGT GCAGCGTGAG
GCGGTGGTGC ATGCGCATCC ACGGGGCGAG GGCTTCAAGG AATGCATCAT CTGCGCGTTC
GCCGACGGCT TGCGTCATCG TCCGCAGACC ACGTTCGGCA ATGTGAAGAC CGATGTGCTG
AAGGATCAGG TACCGGGTTT CAAGCCGATG AATTTCGTCG AGGTGATTCG CCAGTCGCCC
TGGGTTTCCT GA
 
Protein sequence
MTAFSTRKLN MTTTIAGIRI PDSALARATT EYIRDIESDL LYHHSRRVFL FGALSGERQQ 
LAYDPELLYV GAMLHDLGLV EGHRSDDERF EVDGANAAAA FLKPYGLSDD DIEQVWLSIA
LHTTPGVPKH LRPTVALVTA GVEMDVLGMD YAAFTTVQRE AVVHAHPRGE GFKECIICAF
ADGLRHRPQT TFGNVKTDVL KDQVPGFKPM NFVEVIRQSP WVS