Gene Pfl01_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5385 
Symbol 
ID3714798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6048054 
End bp6048719 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_351113 
Protein GI77461606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC AGCACCAGTA TGTCGACGGT ACGCGGATTC ATTTTCCGCT GGGGAAAGTG 
GTGTGCATCG GCCGTAACTA CGCCGAACAC GCCAAGGAAC TGGACAACCC GGTGCCTACC
GAGCCGTTGC TGTTCATCAA GCCGGGCAGT TGCGTGGTGC CGCTGGAAGG CAGTTTCAGC
ATTCCGACCG AGCGTGGCTC GGTGCATTAC GAGGCGGAAA TCGCCGTGTT GATCGGCAAA
CCGCTGTCGA CCAAACCGAG CCGTGAAGAA GTGCTGGACG CGATCTCCGG TTTCGCCCCG
GCGCTGGACC TGACCCTGCG CGACAAGCAG GCCGAGCTCA AATCCAAGGG CCTGCCGTGG
GAAATCGCCA AGTCGTTCGA CGGCGCGGCG GTGATTGCAC CGTTCGTGGT CGGCAGCACT
TTCGCCGACC TGACCGACAT CGGCATTCGC CTGACCATCA ATGGCGAAGT GCGCCAGGAC
GGTAACAGCA GCGCCATGCT CAACCCGATC GTGCCGATGA TCCAGCACAT GGCCGGCTGC
TTCTCGCTGC AGGCCGGTGA CGTGATCCTG ACCGGCACGC CAGTGGGCGT CGGCCCGCTG
AACGTTGGCG ATGAGATCGT GCTGGAACTG CCGGGCGCCA GTCGTTTTAC CAGCAGCGTT
CGCTGA
 
Protein sequence
MSYQHQYVDG TRIHFPLGKV VCIGRNYAEH AKELDNPVPT EPLLFIKPGS CVVPLEGSFS 
IPTERGSVHY EAEIAVLIGK PLSTKPSREE VLDAISGFAP ALDLTLRDKQ AELKSKGLPW
EIAKSFDGAA VIAPFVVGST FADLTDIGIR LTINGEVRQD GNSSAMLNPI VPMIQHMAGC
FSLQAGDVIL TGTPVGVGPL NVGDEIVLEL PGASRFTSSV R