Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5370 |
Symbol | |
ID | 3714783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6031902 |
End bp | 6032765 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_351098 |
Protein GI | 77461591 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.626785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGAGTG CCGAGCTGAA AGCGTTTTAC ATGGTGGCCC GCTTGGGCAG CATCACGCTG GCGGCGAAAA AGCTCGGCCT CAGCCAACCG ACCGTGACCA CCCAGATCCG CAATCTGGAA AGCCAGTATT CGGTAGAGCT GTTCTACCGT GGCGGCCGGC GCCTGAGTGT CAGCGACGAA GGTGCGCGGC TGTTGCCGAT GGTCAAGGCG TTGTTGCAGC AGGAGGCCGA CATCGAATTC TTCCTGCGCA ACAGTGGCCA GGTGCAGGGT GCGCTGCGCA TCGCCGCCAC CGCGCCGTAT TACATCCTCG ATCTGGTGAA GACCTTCCGC GAGCGCCTGC CGCAGGTGGA GGTGTCGGTG GAAATCGGCA ACTCGCAGCA GGTGCTCGAA GCGCTGGAGG ATTATCGGGT GGATGTCGCG GCGTCGTCGC AATTGCTCGA CGATGCCCGG CTGATCCGCC GGGTGCTCGG CAGCGACCCG CTGGTGCTGG CGGTGCATCG CAATCATCCG CTGGCGGCGC ACGACCATGT GACGCTGAGC GCGCTGGCCG GACATACCTT GCTGATGCGC GAACCGGGTT CGACCACTCG ACGGCTCACC GAAGAGTTGC TGGCCAGCGC CGGCGTCAGT TTTGGCCCGT TGCTGGAGAT AGGCAGCCGC GAATCGATCC GCGAGGCGGT GCTGCGCAAC ATCGGCATCA GCATCATCGC CCGCCAGGAA GTGCCGCACG ATCCGCAGTT GCGGGTGCTG ACCCTGGAGA ATGCGCCGCA GATTCCCGAA TACCTCTACT GCCTCAAGGA ACGCAAGAAC GCCCGGTTGC CGGCGGCGTT TCTCGGACTG GCGCAGGAAA TGTCCCCGGC CTGA
|
Protein sequence | MLSAELKAFY MVARLGSITL AAKKLGLSQP TVTTQIRNLE SQYSVELFYR GGRRLSVSDE GARLLPMVKA LLQQEADIEF FLRNSGQVQG ALRIAATAPY YILDLVKTFR ERLPQVEVSV EIGNSQQVLE ALEDYRVDVA ASSQLLDDAR LIRRVLGSDP LVLAVHRNHP LAAHDHVTLS ALAGHTLLMR EPGSTTRRLT EELLASAGVS FGPLLEIGSR ESIREAVLRN IGISIIARQE VPHDPQLRVL TLENAPQIPE YLYCLKERKN ARLPAAFLGL AQEMSPA
|
| |