Gene Pfl01_5370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5370 
Symbol 
ID3714783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6031902 
End bp6032765 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_351098 
Protein GI77461591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.626785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGTG CCGAGCTGAA AGCGTTTTAC ATGGTGGCCC GCTTGGGCAG CATCACGCTG 
GCGGCGAAAA AGCTCGGCCT CAGCCAACCG ACCGTGACCA CCCAGATCCG CAATCTGGAA
AGCCAGTATT CGGTAGAGCT GTTCTACCGT GGCGGCCGGC GCCTGAGTGT CAGCGACGAA
GGTGCGCGGC TGTTGCCGAT GGTCAAGGCG TTGTTGCAGC AGGAGGCCGA CATCGAATTC
TTCCTGCGCA ACAGTGGCCA GGTGCAGGGT GCGCTGCGCA TCGCCGCCAC CGCGCCGTAT
TACATCCTCG ATCTGGTGAA GACCTTCCGC GAGCGCCTGC CGCAGGTGGA GGTGTCGGTG
GAAATCGGCA ACTCGCAGCA GGTGCTCGAA GCGCTGGAGG ATTATCGGGT GGATGTCGCG
GCGTCGTCGC AATTGCTCGA CGATGCCCGG CTGATCCGCC GGGTGCTCGG CAGCGACCCG
CTGGTGCTGG CGGTGCATCG CAATCATCCG CTGGCGGCGC ACGACCATGT GACGCTGAGC
GCGCTGGCCG GACATACCTT GCTGATGCGC GAACCGGGTT CGACCACTCG ACGGCTCACC
GAAGAGTTGC TGGCCAGCGC CGGCGTCAGT TTTGGCCCGT TGCTGGAGAT AGGCAGCCGC
GAATCGATCC GCGAGGCGGT GCTGCGCAAC ATCGGCATCA GCATCATCGC CCGCCAGGAA
GTGCCGCACG ATCCGCAGTT GCGGGTGCTG ACCCTGGAGA ATGCGCCGCA GATTCCCGAA
TACCTCTACT GCCTCAAGGA ACGCAAGAAC GCCCGGTTGC CGGCGGCGTT TCTCGGACTG
GCGCAGGAAA TGTCCCCGGC CTGA
 
Protein sequence
MLSAELKAFY MVARLGSITL AAKKLGLSQP TVTTQIRNLE SQYSVELFYR GGRRLSVSDE 
GARLLPMVKA LLQQEADIEF FLRNSGQVQG ALRIAATAPY YILDLVKTFR ERLPQVEVSV
EIGNSQQVLE ALEDYRVDVA ASSQLLDDAR LIRRVLGSDP LVLAVHRNHP LAAHDHVTLS
ALAGHTLLMR EPGSTTRRLT EELLASAGVS FGPLLEIGSR ESIREAVLRN IGISIIARQE
VPHDPQLRVL TLENAPQIPE YLYCLKERKN ARLPAAFLGL AQEMSPA