Gene Pfl01_5369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5369 
Symbol 
ID3714782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6030718 
End bp6031794 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_351097 
Protein GI77461590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTG CAATCGCAAC TGCCCTGACC AACCCCGGCG CACAGATGAA AGTGCGCGGC 
GTGCAGAAGC GCTTCGGCGC CTTCACGGCG CTGGATAACG TCTCCCTCGA TGTCGCGGCC
GGTGAGCTGG TGTGCCTGCT CGGCCCGTCG GGCTGTGGCA AGACAACATT GTTGCGTTGC
ATCGCCGGCC TGGAGAAACA GGACAGCGGC GAGTTGTACC TCGGCGAGCG CGACGTTTCC
CACCTCGCCC CGCAGGCTCG GGACTACGGC ATCCTGTTCC AGTCGTACGC GCTGTTTCCC
AATCTGACCG TCGAAGCGAA CATTGCCTAC GGCCTCGCCG GCAGCGGTCG CGATGAAGTG
CGCCGTCGCG TCGGTCAGAT GCTGGAACTG GTCGGCCTCA CCGGCAGTGA GAAAAAGTAC
CCGGGCCAGT TATCCGGCGG CCAGCAGCAA CGAGTCGCAT TGGCCCGTGC CCTGGCCCCC
GCGCCGTCGC TGCTGTTGCT CGACGAACCG ATGTCGGCCC TCGACGCCCG GGTCCGCGAG
CATCTGTGCA CTGAACTGCG CCAACTGCAA CGCAACCTCG GCATCACCAC CCTGATGGTC
ACCCACAATC AGGATGAAGC CATGCTGATG GCCGACCGCA TCGCCGTGAT GAACAACGGC
AAGGTCGAGC AGTACGCCAC CCCGCAGGAC ATCTACAACC GCCCGGCCAC TCCGTTCGTG
GCCGAGTTTG TCGGCCAAGG CAACTGGCTG CCGTTCCAGC GCAGCAGCGA CAGCCACGCC
AAGGTCGGCG GGATGAACCT GCGCCTGGCC GACGGCAGCG TCCACAGTCC GTCGGGTCGA
CTGTTCTGCC GCCCGGAAGC GATCAACGTC AATCCGCTGG TACATGAGGA AAACCTGTTC
CCGGCCAAAG TCCGCGAGAT CACTTTCCTC GGCAACCGCT GCCGCATGAG CTTCGAGCTC
GATCAATTGC CCGGCCACGC CTTGCTCGCC GAACTGGCAC CGGAAGCCAT GCCGCGCCTC
GGCGCCCAGC AGATCATGGT CGCCTTACCG CCACGCTGCT TGCAGGTGTT TGCCTGA
 
Protein sequence
MNPAIATALT NPGAQMKVRG VQKRFGAFTA LDNVSLDVAA GELVCLLGPS GCGKTTLLRC 
IAGLEKQDSG ELYLGERDVS HLAPQARDYG ILFQSYALFP NLTVEANIAY GLAGSGRDEV
RRRVGQMLEL VGLTGSEKKY PGQLSGGQQQ RVALARALAP APSLLLLDEP MSALDARVRE
HLCTELRQLQ RNLGITTLMV THNQDEAMLM ADRIAVMNNG KVEQYATPQD IYNRPATPFV
AEFVGQGNWL PFQRSSDSHA KVGGMNLRLA DGSVHSPSGR LFCRPEAINV NPLVHEENLF
PAKVREITFL GNRCRMSFEL DQLPGHALLA ELAPEAMPRL GAQQIMVALP PRCLQVFA