Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5344 |
Symbol | |
ID | 3714913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6004068 |
End bp | 6004739 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_351072 |
Protein GI | 77461565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAC GGATCAAAAC CAGCGAGCGC ATCGTGCAGA ACAGCCTCGA GCTGTTCAAT CAGCAGGGCG AGCGCAGCAT CAGCACCAAT CACATCGCCG CCCACATGGA GATTTCTCCG GGCAATCTGT ACTACCACTT CCCCAACAAG CAGGCGATCA TCGCCGTGCT GTTCAGTGAG TACGAAAGCC TGGTGGACAG CTTCCTGCGT CCGCCCCAGG GCCGTGCCGC GACGGTTGAA GACAAGCGCT TCTATCTCAA GGAATTGCTG TCGGCGATGT GGCGCTACCG CTTTCTGCAC CGCGATCTCG AACACTTGCT CGACAGCGAT CCGGATCTGG CCGCGCGTTA TCGCCGCTTC TCCCAGCGCT GCGTAATCCA GGGCGCAGCG ATCTACGAAG GCTTTGTCGC TGCCGGGATC CTGAAGATGG ACCGAGTGCA GATCGAATCC CTGACCCTCA ACGCATGGAT CATCCTCACC TCGTGGGTGC GCTTCCTGTG CACGACCCGG GAGAACTCCA ATTACCTCAG TGAACAGGCC ATCAAGCGTG GCGTGTATCA GGTGCTGGTG CTGGAAGCGG GGTTTGTCAC CGAGCAGGCC CGCGATGAGG TCAACGCCTT GTTCGAAGAG TTCTACGTGC CGCTGGCCCA GGCCCTCGAA GAAAGACCGT AA
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Protein sequence | MAPRIKTSER IVQNSLELFN QQGERSISTN HIAAHMEISP GNLYYHFPNK QAIIAVLFSE YESLVDSFLR PPQGRAATVE DKRFYLKELL SAMWRYRFLH RDLEHLLDSD PDLAARYRRF SQRCVIQGAA IYEGFVAAGI LKMDRVQIES LTLNAWIILT SWVRFLCTTR ENSNYLSEQA IKRGVYQVLV LEAGFVTEQA RDEVNALFEE FYVPLAQALE ERP
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