Gene Pfl01_5344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5344 
Symbol 
ID3714913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6004068 
End bp6004739 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_351072 
Protein GI77461565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAC GGATCAAAAC CAGCGAGCGC ATCGTGCAGA ACAGCCTCGA GCTGTTCAAT 
CAGCAGGGCG AGCGCAGCAT CAGCACCAAT CACATCGCCG CCCACATGGA GATTTCTCCG
GGCAATCTGT ACTACCACTT CCCCAACAAG CAGGCGATCA TCGCCGTGCT GTTCAGTGAG
TACGAAAGCC TGGTGGACAG CTTCCTGCGT CCGCCCCAGG GCCGTGCCGC GACGGTTGAA
GACAAGCGCT TCTATCTCAA GGAATTGCTG TCGGCGATGT GGCGCTACCG CTTTCTGCAC
CGCGATCTCG AACACTTGCT CGACAGCGAT CCGGATCTGG CCGCGCGTTA TCGCCGCTTC
TCCCAGCGCT GCGTAATCCA GGGCGCAGCG ATCTACGAAG GCTTTGTCGC TGCCGGGATC
CTGAAGATGG ACCGAGTGCA GATCGAATCC CTGACCCTCA ACGCATGGAT CATCCTCACC
TCGTGGGTGC GCTTCCTGTG CACGACCCGG GAGAACTCCA ATTACCTCAG TGAACAGGCC
ATCAAGCGTG GCGTGTATCA GGTGCTGGTG CTGGAAGCGG GGTTTGTCAC CGAGCAGGCC
CGCGATGAGG TCAACGCCTT GTTCGAAGAG TTCTACGTGC CGCTGGCCCA GGCCCTCGAA
GAAAGACCGT AA
 
Protein sequence
MAPRIKTSER IVQNSLELFN QQGERSISTN HIAAHMEISP GNLYYHFPNK QAIIAVLFSE 
YESLVDSFLR PPQGRAATVE DKRFYLKELL SAMWRYRFLH RDLEHLLDSD PDLAARYRRF
SQRCVIQGAA IYEGFVAAGI LKMDRVQIES LTLNAWIILT SWVRFLCTTR ENSNYLSEQA
IKRGVYQVLV LEAGFVTEQA RDEVNALFEE FYVPLAQALE ERP