Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5338 |
Symbol | |
ID | 3714907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5997841 |
End bp | 5999196 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | peptidase M16-like |
Protein accession | YP_351066 |
Protein GI | 77461559 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.796458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTC TAGCCCGCCG CGCCGCAGGC CTGCTGCTCA GCACAGTCTG CCTGCCCCTT TCGGCCCTGG CGGCCGACCC GCAACCGACA CACGAATTCA CCCTCGACAA CGGCCTGAAG GTCGTCGTGC GCGAAGACCA TCGCGCGCCG GTGGTAGTGT CGCAGGTCTG GTACAAGGTC GGCTCCAGCT ACGAAACTCC GGGCCAGACC GGTCTGTCCC ACGCCCTCGA GCACATGATG TTCAAGGGCA GCGAGAAAGT CGGCCCCGGC GAAGCCTCGC TGATCCTGCG CGACCTCGGC GCCGAAGAGA ACGCGTTCAC CAGCGACGAC TTCACCGCTT ATTACCAGGT GCTGGCCCGC GACCGTCTGG GCGTGGCCTT CGAACTGGAA GCCGACCGCA TGGCCAACCT GCGCCTGCCG GCCGACGAGT TCGCCAAGGA AATCGAAGTC ATCAAGGAAG AGCGCCGTCT GCGCACCGAC GACAAGCCGA TGGCCAAGGC CTACGAGCGC TACAAGGCCA TGGCCTACCC GGCCAGCGGT TACCACACGC CGACCATCGG CTGGATGGCC GACCTTGAGC GGATGAAGGT CGAAGAGCTG CGCCACTGGT ATCAGTCCTG GTACGTGCCG AACAACGCCA CACTGGTGGT GGTCGGCGAC GTGACCCCGG ACGAGGTGAA GACCCTCGCC CAGCGCTACT TCGGGCCGAT CCCGAAACGC GACGTGCCGC CGGCGAAAAA GCCGCTGGAA CTGGCCGAAC CGGGTGAACG CCAGATCACC CTGCACGTGC AGACTCAACT GCCGAGCCTG ATGCTTGGTT TCAACGTCCC GAGCATCGCC ACCGCCGAAG ACAAACGTTC GGTCAACGCC TTGCGCCTGA TTTCGGCGCT GCTGGACGGC GGCTACAGCG GTCGCATCCC GACCCAACTG GAGCGTGGCG AAGAACTGGT GTCCGGCGGT TCGTCGAGCT ACGACGCCTA CACCCGCGGC GACAGCCTTT TCACCCTGTC GGCCACGCCG AACACCCAGA AGAAAAAGAC CATGGCCCAG GCGGAAGCCG GCCTGTGGAA ACTGCTGGAG CAGCTGAAAA CCAGCGCACC GTCCGCCGAA GAACTGGAAC GCGTGCGTGC GCAGGTCATC GCCGGTCTGG TCTTCGAGCG TGATTCGATC ACCAGCCAGG CCACCGCCAT CGGCCAGCTG GAGACCGTCG GTCTGTCGTG GAAGCTGATG GACACCGAAC TGGCCGACCT GGAAAGCGTC ACCCCGCAAG ACATCCAGAA CGCCGCCAAG CTGTATTTCA CCCGCGAACG TCTCAGCGTC GCCCACGTCC TGCCACTGGA GACGACTCAT GAGTGA
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Protein sequence | MNALARRAAG LLLSTVCLPL SALAADPQPT HEFTLDNGLK VVVREDHRAP VVVSQVWYKV GSSYETPGQT GLSHALEHMM FKGSEKVGPG EASLILRDLG AEENAFTSDD FTAYYQVLAR DRLGVAFELE ADRMANLRLP ADEFAKEIEV IKEERRLRTD DKPMAKAYER YKAMAYPASG YHTPTIGWMA DLERMKVEEL RHWYQSWYVP NNATLVVVGD VTPDEVKTLA QRYFGPIPKR DVPPAKKPLE LAEPGERQIT LHVQTQLPSL MLGFNVPSIA TAEDKRSVNA LRLISALLDG GYSGRIPTQL ERGEELVSGG SSSYDAYTRG DSLFTLSATP NTQKKKTMAQ AEAGLWKLLE QLKTSAPSAE ELERVRAQVI AGLVFERDSI TSQATAIGQL ETVGLSWKLM DTELADLESV TPQDIQNAAK LYFTRERLSV AHVLPLETTH E
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