Gene Pfl01_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5333 
SymbolmtgA 
ID3714902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5992495 
End bp5993217 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_351061 
Protein GI77461554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.133704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.435335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TATTTCTCCG TCGTTTCACG AAGGCCCTGC TCTGGTTCGC GGGCGGCAGC 
GTATTGCTGG TGTTGGTGTT TCGTTTCGTG CCGCCACCGG GCACGGCGCT GATGGTCGAG
CGCAAGATCG AATCCTGGGT CGACGGCGAG CCGATCGATC TGCAACGCAC CTGGAAGCCT
TGGGACGAGA TCTCCGATGA CCTGAAGGTC GCGGTGATTG CCGGCGAAGA CCAGAAATTC
CCCGAGCACT GGGGTTTTGA CCTGAGCGCG ATCAAGGCAG CACTGGCCCA CAACGAACTC
GGCGGCTCGA TCCGTGGCGC CAGCACCTTG AGCCAACAAG TGTCGAAGAA CCTGTTCTTG
TGGTCCGGCC GCAGTTATCT GCGCAAGGGC CTGGAGGCCT GGTTTACCGC GCTGATCGAA
GTGTTCTGGC CCAAACAGCG GATTCTCGAG GTGTACCTGA ACAGCGTCGA GTGGGATGAC
GGTGTGTTCG GCGCCGAAGC GGCGGCAAGG CATCACTTTG GCGTAGGCGC CAGGTCGCTG
TCCCGGCAGC AGGCGAGTTA TCTGGCGGCT GTGCTGCCGA ATCCCCGGGT CTGGAGCGCC
AGTCATCCGA CCGCTTACGT GTCGCGCCGG GCCGGCTGGA TTCGCCAGCA GATGAGCCAG
CTGGGTGGCG ACAGCTACCT GCTGACACTC AATGATTCAC GTCGGGCGCC CTGGGCCCAA
TGA
 
Protein sequence
MLRLFLRRFT KALLWFAGGS VLLVLVFRFV PPPGTALMVE RKIESWVDGE PIDLQRTWKP 
WDEISDDLKV AVIAGEDQKF PEHWGFDLSA IKAALAHNEL GGSIRGASTL SQQVSKNLFL
WSGRSYLRKG LEAWFTALIE VFWPKQRILE VYLNSVEWDD GVFGAEAAAR HHFGVGARSL
SRQQASYLAA VLPNPRVWSA SHPTAYVSRR AGWIRQQMSQ LGGDSYLLTL NDSRRAPWAQ