| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5319 |
|---|
| Symbol | |
|---|
| ID | 3715023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5983259 |
|---|
| End bp | 5983945 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_351047 |
|---|
| Protein GI | 77461540 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.213827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA TAGCAGACAA CATTCTCCAG GTTAGTTCGC GTATTCATGC CGCCACCGCT
GCCGCCGGAC GCGATGAAAA CAGCGTCCAG CTGCTGGCCG TGAGCAAGAC CAAACCGTCC
GAAGCCCTGC GTGAAGCGTA TGCCGCCGGC CTGCGTGATT TCGGCGAGAA CTATCTACAG
GAAGCGTTGG GCAAACAGCT CGAACTGGCC GACCTGCCCT TGATCTGGCA CTTCATCGGC
CCCATTCAGT CGAACAAGAC CCGCTCGATT GCCGAGCATT TCGCCTGGGT GCACTCCGTG
GATCGTCTGA AAATCGCCCA ACGCCTGTCC GAACAACGCC CGGCGGATCT GCCGCCACTG
AACATCTGCA TTCAGGTCAA CGTCAGCGGT GAAGCCAGCA AGTCCGGCTG CACCCCGCAA
GACCTGCCGG CCCTGGCCCA GGCCATCAGC GCCCTGCCGC GCCTGAAGCT GCGCGGGCTG
ATGGCAATTC CCGAGCCGAC CGAAGATCGC GCCGAGCAGG ACGCGGCATT CGCCGCCGTT
CAGAAGTTGC AGGCCGGCCT CGATCTGCCG CTCGACACAC TTTCCATGGG CATGAGCCAC
GACCTCGAGT CGGCCATTGC CCAGGGCGCG ACCTGGGTCC GTATCGGTAC GGCCCTGTTC
GGCGCCCGTG ACTATTCCCA ATCTTGA
|
|---|
| Protein sequence | MSTIADNILQ VSSRIHAATA AAGRDENSVQ LLAVSKTKPS EALREAYAAG LRDFGENYLQ
EALGKQLELA DLPLIWHFIG PIQSNKTRSI AEHFAWVHSV DRLKIAQRLS EQRPADLPPL
NICIQVNVSG EASKSGCTPQ DLPALAQAIS ALPRLKLRGL MAIPEPTEDR AEQDAAFAAV
QKLQAGLDLP LDTLSMGMSH DLESAIAQGA TWVRIGTALF GARDYSQS
|
|---|
| |