| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5314 |
|---|
| Symbol | pyrB |
|---|
| ID | 3715018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5978512 |
|---|
| End bp | 5979516 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_351042 |
|---|
| Protein GI | 77461535 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.165994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.237409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTC TAGATACCAA GCGCCCGCTG CAGCTCAATG ATCAGGGCCA GCTGCGCCAC
TTCCTCTCGC TCGACGGCCT GCGCCGCGAG TTGCTGACGG AAATCCTCGA CACCGCCGAC
TCGTTCCTCG AAGTCGGTGC CCGGGCCGTG AAGAAGGTTC CGTTGCTGCG CGGCAAGACC
GTGTGCAACG TGTTCTTCGA AAACTCGACC CGCACCCGTA CCACCTTCGA ACTGGCGGCC
CAGCGCCTGT CGGCGGACGT GATCACCCTG AACGTGTCGA CCTCTTCGGC CAGCAAGGGC
GAAACCCTGC TCGACACCCT GCGCAACCTC GAGGCCATGG CCGCCGACAT GTTCGTCGTG
CGCCACGGTG ACTCGGGCGC CGCGCACTTC ATCGCCGAAC ATGTCTGCCC GCAAGTGGCG
ATCATCAACG GCGGCGACGG CCGGCACGCG CACCCGACCC AGGGCATGCT CGACATGCTG
ACCATCCGCC GTCACAAGGG CGGTTTCGAG AACCTCTCGG TGGCCATCGT CGGCGACATC
CTGCACTCGC GGGTGGCGCG CTCGAACATG CTCGCCCTGA AGACCCTCGG CTGCCCGGAT
ATCCGCGTGA TCGCACCGAA GACCCTGCTG CCGATCGGCA TCGAGCAATA CGGTGTGAAG
GTCTACACCG ACATGACCGA AGGACTGAAA GACGTCGACG TGGTGATCAT GCTGCGCCTG
CAGCGTGAGC GCATGACTGG CGGTCTGCTG CCGAGCGAAG GCGAGTTCTA TCGCCTGTTC
GGCCTGACCA CCGCGCGCCT GGCCGGCGCC AAGCCCGATT GCATCGTCAT GCACCCGGGG
CCGATCAACC GCGGCGTGGA GATCGAGTCG GCGGTGGCCG ACGGCCCGCA CTCGGTGATC
CTCAATCAAG TCACCTACGG CATCGCAATC CGTATGGCCG TGCTGTCGAT GGCCATGAGC
GGACAGACTG CCCAGCGCCA ATTCGAGCAG GAGAACGCCC AGTGA
|
|---|
| Protein sequence | MTPLDTKRPL QLNDQGQLRH FLSLDGLRRE LLTEILDTAD SFLEVGARAV KKVPLLRGKT
VCNVFFENST RTRTTFELAA QRLSADVITL NVSTSSASKG ETLLDTLRNL EAMAADMFVV
RHGDSGAAHF IAEHVCPQVA IINGGDGRHA HPTQGMLDML TIRRHKGGFE NLSVAIVGDI
LHSRVARSNM LALKTLGCPD IRVIAPKTLL PIGIEQYGVK VYTDMTEGLK DVDVVIMLRL
QRERMTGGLL PSEGEFYRLF GLTTARLAGA KPDCIVMHPG PINRGVEIES AVADGPHSVI
LNQVTYGIAI RMAVLSMAMS GQTAQRQFEQ ENAQ
|
|---|
| |