Gene Pfl01_5313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5313 
Symbol 
ID3715017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5977981 
End bp5978484 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_351041 
Protein GI77461534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0338332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CCAATCCCGC CGATCTGATC AGCCAGATGG CGACCCGCCT CAAGGCGCAC 
CTTGCCCAGC GTAATATCAG CGAACCGCGT TACATCGGCA TCCGCACCGG CGGCGTCTGG
GTCGCCCAGG CCCTGCTCGC AGAGCTGGGT AGCGACGCGC CATTGGGCAC GCTGGATGTT
TCCTTCTACC GCGACGACTT CAGCCAGAAC GGCCTGCACC CGCAGGTGCG CCCGTCCGCC
CTGCCCTTCG AAATCGAAGG CCAGCATCTG GTGCTGATCG ACGACGTACT GATGAGCGGC
CGGACCATCC GCGCCGCCAT GAACGAACTG TTCGACTACG GCCGCCCGGC CAGCGTGACG
CTGGTCTGCC TGCTGGACCT GGATGCCGGC GAACTGCCGA TCCGCCCGAA CGTGGTCGGC
GCGACCCTGT CGCTGGCCGC CCACGAGCGG GTCAAGCTGT CCGGGCCGGA GCTGGCCCTC
GAACTGCAAG ACCTTGCCCT TTAA
 
Protein sequence
MSLPNPADLI SQMATRLKAH LAQRNISEPR YIGIRTGGVW VAQALLAELG SDAPLGTLDV 
SFYRDDFSQN GLHPQVRPSA LPFEIEGQHL VLIDDVLMSG RTIRAAMNEL FDYGRPASVT
LVCLLDLDAG ELPIRPNVVG ATLSLAAHER VKLSGPELAL ELQDLAL