Gene Pfl01_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5310 
Symbol 
ID3715014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5975931 
End bp5976830 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID 
ProductTonB-like 
Protein accessionYP_351038 
Protein GI77461531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0148466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.225586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC CGTCCGATCT GCCCGCTGAA CTCGCCCATA AAGGCGTGCG CCCGGTCGAT 
CGCCTCGGAT TTACCCTGTT TCTCGCGGCG CTGATCCATC TGGCGCTGCT GCTCGGCGTG
GGTTTCACCA TGGTCGAGCC CAAGCAGATC AGCAAAACCC TGGAAATCAC CCTCGCCACC
TTCAAGAGCG AAAAGAAGCC GGCGAAGGCC GATTTCCTCG CCCAGGAAAA CCAGGAAGGC
AGCGGCACCC TCGACAAGAA GGCGATCCCC AAGACCACCG AGGTCGCGCC GTTCCAGGCA
AACGAAGTCA AGAAAGTCAC CCCGCCGCCC GCCGCCAAGC CGGAAGTGCA GGAAGCCGCA
CCCAAAGCAG CAGTGACGAC CGTCGCGCCG AAACCGAAAA AGGCGCCGAC CAAGAAAGAA
GAAGCCAAGA CCGAGACCAA ACCGACGGTC GACGCCCCGA CCTTCGACAG CTCGCAGCTC
TCCAGCGACA TCGCCAGCCT CGAAGCCGAA CTGGCCAACG AACAACAGCT GTATGCCAAG
CGCCCACGCA TCCACCGCCT CAGCGCCGCG TCGACCATGC GCGACAAGGG CGCCTGGTAC
AAGGACGAGT GGCGCAAGAA GGTCGAGCGC ATCGGCAACC TCAATTACCC CGACGAAGCC
CGGCGCAAGC AGATCTACGG CAATCTGCGC CTGATGGTGT CGATCAACCG CGACGGCTCG
CTGTATGAAG TGCTGGTGCT GGAGTCCTCC GGCCAGCCGC TGCTGGATCA GGCAGCACAA
CGCATCGTGC GACTGGCAGC CCCGTTTGCA CCGTTTACCG GGGACCTGTC GGACATCGAC
CGGCTGGAAA TCATCCGCAC CTGGAAATTC GCCCGGGGCG ACCGGCTGTC CAGTAACTGA
 
Protein sequence
MTLPSDLPAE LAHKGVRPVD RLGFTLFLAA LIHLALLLGV GFTMVEPKQI SKTLEITLAT 
FKSEKKPAKA DFLAQENQEG SGTLDKKAIP KTTEVAPFQA NEVKKVTPPP AAKPEVQEAA
PKAAVTTVAP KPKKAPTKKE EAKTETKPTV DAPTFDSSQL SSDIASLEAE LANEQQLYAK
RPRIHRLSAA STMRDKGAWY KDEWRKKVER IGNLNYPDEA RRKQIYGNLR LMVSINRDGS
LYEVLVLESS GQPLLDQAAQ RIVRLAAPFA PFTGDLSDID RLEIIRTWKF ARGDRLSSN