| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5304 |
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| Symbol | |
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| ID | 3715200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5964977 |
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| End bp | 5970892 |
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| Gene Length | 5916 bp |
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| Protein Length | 1971 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | CheA Signal transduction histidine Kinases (STHK) |
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| Protein accession | YP_351032 |
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| Protein GI | 77461525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.266028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACC GGCACGACTA CGTGGCCCTC GAATGGGTCA AGGGTGAAAT CGCCGAGACG
CTGAGGCAGG CGCATCAGGC CATCGAAGCC GTGCTCGACG ATCCGCAGTC GGTGCCGGGA
CTGGGCGAGT GCCTGGCCTG CATCCATCAG GTGCACGGCA GCCTGCAGAT GGTCGAGTTC
TACGGCGCGG CGCTGCTGGC CGAAGAGATG GAACACCTGG TCGAAGCGTT GCAGAACGAC
CGCGTCAGCC ATCGTGACGA AGCGCTGCAC TTGTTGCTGC AGGCGCTGGG CCAATTGCCG
ATCTACCTCG ACCGCGTGCA GGGCGCCCGC CGTGACCTGC CGCTGGTGGT GCTGCCGCTG
ATCAACGACT TGCGCAGTGC CAGAGGCGAA AGCCGGTTGT CGGAAACCAG CCTGTTCAGC
CCGCAGTTGC CCGAACTGGC GCCGTTGGGC GAGGAAACTC TGGCACTGTT GGAGCCGGCG
GAGCTGCCGA ACGTGCTGCG CAAATTGCGC CAGATGCTGC AAATGGCGCT GGTCGGACTG
CTCCGCGAGC AGGATGACCA GACGCATCTC GCTTATCTGG CCAAAGTCTT TACCCGGCTT
GAAGCAATCA GCGGTAACTC GCCGCTGAGC CCGTTGTGGC AGGTCGCCTC GGCGCTGGTC
GAGGGCATGC GCGAAGGGCG AATCGCCAAC AGCCCGGCCC TGCGCAGCCT GTTCAAGGAC
GCCGACAAGG AACTCAAGCG CCTGCTCGAA CAGGGCATGC CCGGCCTCAA CCAGCCGCCA
CCGCCTGAAC TGCTGAAAAG CCTGCTGTTT TATATCGCCA AAGCCGAACA TCCCACCGGG
CAGATGCTGA CCATGAAAGA TCGCTACTCC CTGGACGACG CGCTGCCCGA CAGCGCGATG
GTCGACGAAG AACGCGCGCG CCTGGCCGGC CCTGACCGCG ATGCCATGCG CTCGGTGCTC
GCGGCGCTGT GCGAAGAACT GGTGCGGGTC AAGGAACGCC TCGACCTGTT CGTGCGCAGC
GACCGTCAGC ACGCCTCGGA TCTGGACAGC CTGCTGGCGC CACTGCGGCA GATCGCCGAC
ACCCTGGCGG TGCTCGGTTT CGGCCAGCCG CGCAAGGTGA TCATCGATCA ACTGGCGGTG
GTGCTCAGCC TCGCGCAAGG CCAGCGCGAA CCGAACGACG CCACGCTGAT GGACGTCGCC
GGTGCCTTGC TTTACGTCGA AGCGACGCTG GCCGGAATGG TCGGCACGGT GGAACCGGAG
AGCCCGGAAG ACTCGCGCCT GCCAACCACC GACCTGACGC AGATCCATCA GATCGTGATC
AAGGAAGCAC GTATCTGTCT GCAACAGGCC AAGGACATGA TCGTCGATTA CATCGACGCC
GACTGGGATC GCCAGCAACT GCAAAGCCTG CCGGCGCTGC TGACCCAGGT GCGCGGCGCG
CTGGCGATGA TTCCGCTGGC ACGCGCGGCC AGCCTGCTCG AAGCCTGCAA TGGATTTATC
CGCGAGCATC TGTTGCTCGA CCCTCACGAG CCGGGCTGGC AGCAACTCGA CAGCCTCGCC
GACGCCATCA CCAGCCTCGA GTACTACCTC GAGCGCCTGA GCGGCGACCC GCAGGCACCC
AGCGAGCACT TGCTGGATAT CGCGCAGAAA AGCCTCGCCA GTCTCGGTTT CTTTCCTGAT
GAAGAGCCCG GCGAGCCGCA TGTGCCGGTG CTCGATGATG TGCTCAGCCC CAGCGAAGCG
CTGGTGATGC AGGATTTGCA GGAGCTGGAC GACCCGCAGA TCGTGCAGTC GTTGGCCGAA
GTGCTGGCCA GTCCGGTGTC AGCGGTCAAC CCGCCGGCGC AGACCACGCC GGGCAGCCTG
CTGCCGCCAC CGGCCGATGA AGAACCGGTG GACGACGAGC TGCGTGAAGT GTTCCTGGAA
GAGACCGGTG AAGTGCTCGA GGTGCTGAGC GAATACCTGC CGCGCTGGTC TGCCGAGCCT
GATGACCGCG CCGCCCTCAG TGAGCTGCGC CGCGCCTTCC ACACCCTCAA GGGCAGCGGC
CGGATGGTGC GGGCGTTGGT CCTCGGCGAG CTGGCCTGGG CGGTGGAAAA CCTGCTCAAC
CGTGTGCTGG AAAACAGTGT CGAGCCCGGC CCGGCGGTGC GCCAGTTGCT GGCCGACACA
CTGCTGTTGT TGCCGGACCT GATCGCCGAA TTCGCCACCA ATGGCCAGCG TCAGCGCCAC
GATGTCGATC AACTGGCGGC CCGCGCCCAT GCGCTGGCCA AGGGCGACAC ACCGCTGCCT
GCCGAAGACG TGGAAGACGT CGCGGCCCTC GATCCGCTGT TGCTGGAGAT TTTCCGCAAC
GAAGCCGAAA CCCACCTCGC CAGCCTCAAT CGTTTTCTCG ATCAGGCTGC CGAGCATGTG
CCGTTGCAGG CCAGCGACGA GTTGCAGCGA GCCCTGCACA CCCTCAAGGG CAGCGCCTCG
ATGGCGGGGG TGTCACCGAT TGCCGAACTG GCGGCGCCGC TGGATAAACT GGCCCGGGAA
TTCAAGGCCC ATCAACTGGC GCTGGACCTG GATGAAGTGG AACTGCTGCT CGAAGCCGAG
GGCCTGTTCC GTGTCGGTCT GCGTCAGCTC AAACACGATC CACTGGCGCC GATTGTCGGT
GCGCAGTCAC TGATCAAACG CACCGAAACC CTGCTCGGCG AGCGTCTGGA ATCGATCCTC
AATGCCCCGA GCAGTGCGGT GCGGGTCAAG CGCGATCCGC AACTGATCAA CAACTTCCTG
GCCCAGGGCA TGGACATCCT GCTCGACGCC GAAAACCTCT TGCAGCGCTG GCAGCAGCAC
CCCGGCGAAC GTCAGGAACT CAGCGCGCTG CTGGATGAGC TGACTACCCT GGGCGAAGCC
GCACACCTGG CGGATCTGCT GCCGGTGGAT GTGCTGTGTG AAGCCTTGCT CGATCTGTAC
GGCGCGGTCG AAGAAAGCAG CCTGGCGGTC AGCGAGCGGT TTTTCCATGA AGCGCAGCAG
GCCCACGAAG CGCTGATCAA CATGCTCGAC GAACTGGCCG CCGGCCAGGA AATCACCCCG
CAACCGCAGC GCATCCGAGC CTTGCACGAA CTGCTCGACG AGAGCCTCGA TCCGTCCTCC
ATGGGCCTGA TCCGCAGCGA CGGCAGCCGC ACCCTGAGCA TCCGTGAACT GGGCAGCGCC
ACCGCCGAAC TGCAACAACA CAGCGCCGAC AGCGGGCCGG ACGACGAGAT CGTCGAGATC
TTTCTAGAAG AGGCGGTGGA CATTCTCGAC AGCGCCGGCC AAGCCTTGCA GCGCTGGCTG
AAGGATCCGG AAAACGGTGC ACCGCTGTCG TCGCTGCAAC GGGATTTGCA CACGCTCAAG
GGCGGCGCAC GGATGGCCGA GGTGACAGCC GTCGGCGATC TGGCCCATGA GCTGGAAGGC
CTGTACGAAG GGCTGGTGGA TCGTCGTTAC AGCCACAGCG AAGCTCTGGA TCGATTGCTG
CGTCAGAGCC ACGAGCGTCT GGCGCAGTTC CTCGAACAGT TGCACCGGCA CCAGCCGCTG
GATCCGGCGC AGGACCTGAT CGAGGCGATC CGCCGCTTTC GCCAGGGCCC GAGCGCCAGT
CCCGAAACAC CGACAGCTTC CGTCACGCAG GACGGCCCCG GACACGATCC GGAGCTGCTG
GAAATCTTCC TCGAAGAAGG TTTCGACATC ATCGAAAACT CCGGCGCCGC GCTGCTGCGC
TGGCAGGCCG AGCCCGGCAA TCGCCAGGAA GTGGAAACCC TGCTGCGCGA CCTGCACACC
CTCAAGGGCG GCGCGCGGAT GGTGGAAATC GGCCCGATCG GCGACCTCGC CCACGAGCTG
GAATACCTTT ACGAAAGCCT GTCTGCCGGC ACCCTGCAGG GCAGCGCCGA ACTGTTCGCG
CTGTTGCAGC GCGGCCAGGA CCGCTTGGCG CAGATGCTCG ACGCTGTGCG CGCCGGCCAG
CCGTGCCCAC CGGCAGACCG GTTGATCAGT GCGATCCAGA ATTTCAGCCA TCCGCTGGTC
GTGCAAACTC CGGCGCCCGT GCCGTCGGTG GCGGTCAAGG TCGAGCCTGC TGCCCCGGCG
CCCGAGGCCG GGGCAGACAT GGTCAAGGTC TCCGCCGAGT TGCTGGATGA CCTGGTCAAT
CTCGCCGGCG AAACCTCGAT TTTCCGTGGG CGCATCGAGC AGCAGGTCAG CGATGCGCAG
ACCGCCCTGC ACGAGATGGA AACCACCATC GAGCGGATGC GCGACCAGTT GCGCCGGCTC
GACACCGAAA CTCAGGGGCG GATCCTCAGC CGTCAGCAAG TGGACGCCGA ACGCCTCGGC
TACGAAGATT TCGACCCGCT GGAAATGGAC CGCCATTCGC AGTTGCAACA GCTGTCACGG
GCGCTGTTCG AGTCCGCTTC CGACTTGCTG GATCTGAAGG AAACCCTCGA CCGGCGCACT
CACGACGCCG AGAACCTGTT GCAGCAGCAG GGGCGGATCA ACACCGAATT GCAGGAAGGC
CTGATGCGCA CGCGCATGGT GCCGTTCGAG CGCATGTTGC CGCGTCTGAA ACGTATCGTC
CGGCAGGTCG CCGAAGAGTT GGGCAAGGAC GTCGCGTTCA GCGTCGGCAA CGCCGAAGGC
GAGATGGACC GCAACGTCCT CGAACGCATG GCCGCACCGC TGGAGCACAT GCTGCGCAAC
GCCGTCGACC ATGGTCTGGA GTCCGCCGAA GTCCGGCTGG CGGCGGGCAA ACCGGCGCAG
GGGCAGATCA GCCTCGACCT GTCCCGCGAG GGCGGCGATA TTGTGTTCGA CATCCGCGAC
GATGGCGCCG GCGTGCCGCT GGACGCCGTG CGGCACAAAG CGATCAAGCG CGGTCTGCTG
GCGCCGGACG CCGAGATCAG CGACCGCGAG GTGTTGCAGT TCATCCTCCA GCCAGGCTTT
TCCACGGCCG AGAAAATCAC CCAGATTTCC GGGCGCGGCG TGGGCATGGA CGTGGTGCAC
GAAGAAGTCC GGCAACTGGG CGGAACCATG AGCATCGACT CGGTGCCGGG GCAGGGCGTG
CACTTCCGCA TTCGCCTGCC GTTCACCGTG TCGGTCAACC GTGCGCTGAT GGTGCAGTGT
GGTGAGGATC AGTATGCGAT TCCGTTGAAC ACCATCGACG GCATCGTCCG CGTGCTGCCG
AATGAGCTGG ACGGGCATTT CCGACTCGAT CCGCCGAGTT ATCAATACGG CGGCCAGCGT
TATGAGCTGT GTTACCTGGG CGAGCTGCTG AAAACCGCGC CACGACCAAA ACTGTCCGGC
CAGAGCCTGC CGGTGCCGGT CTTGCTGGTG CAGTGCAACG ACCGGCACAT CGCGGTGCAG
GTCGACACGA TGGCCGGCAC CCGCGAAATC GTGGTCAAGA GTCTCGGCCC GCAGTTCGCA
TCGGTGCAGG GCGTGTCCGG GGCGACGATT CTCGGCGATG GCCGGGTGGT GCTGATTCTC
GACCTGCTGG CGCCGATCCG TGCGATGCAG GCGCGGTTGC CGCAGCGTCC GACCAGTCAC
GAAATCGAGA GCGAACCACA GAAGCCGTTG CTGGTGATGG TGGTCGACGA CTCGGTCACG
GTGCGCAAGG TCACCAGCCG CCTGCTCGAA CGCCACGGCA TGAACGTGCT GACCGCCAAG
GACGGGGTCG ATGCGATGTT GCTGCTGGAA GAACACATGC CGGACCTGAT GCTGCTAGAC
ATCGAAATGC CGCGCATGGA CGGCTTCGAA GTGGCGACCC AGGTACGCCA CGACGAACGC
CTGCAACACC TGCCGATCAT CATGATCACC TCGCGCACCG GCCAGAAACA CCGCGACCGC
GCGATGGCCA TCGGCGTCAA CGACTACCTC GGCAAGCCGT ACCAGGAATC GGTGCTGCTC
GAAAGCATCG CCCTGTGGAG CAAAAAACAT GCATGA
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| Protein sequence | MGDRHDYVAL EWVKGEIAET LRQAHQAIEA VLDDPQSVPG LGECLACIHQ VHGSLQMVEF
YGAALLAEEM EHLVEALQND RVSHRDEALH LLLQALGQLP IYLDRVQGAR RDLPLVVLPL
INDLRSARGE SRLSETSLFS PQLPELAPLG EETLALLEPA ELPNVLRKLR QMLQMALVGL
LREQDDQTHL AYLAKVFTRL EAISGNSPLS PLWQVASALV EGMREGRIAN SPALRSLFKD
ADKELKRLLE QGMPGLNQPP PPELLKSLLF YIAKAEHPTG QMLTMKDRYS LDDALPDSAM
VDEERARLAG PDRDAMRSVL AALCEELVRV KERLDLFVRS DRQHASDLDS LLAPLRQIAD
TLAVLGFGQP RKVIIDQLAV VLSLAQGQRE PNDATLMDVA GALLYVEATL AGMVGTVEPE
SPEDSRLPTT DLTQIHQIVI KEARICLQQA KDMIVDYIDA DWDRQQLQSL PALLTQVRGA
LAMIPLARAA SLLEACNGFI REHLLLDPHE PGWQQLDSLA DAITSLEYYL ERLSGDPQAP
SEHLLDIAQK SLASLGFFPD EEPGEPHVPV LDDVLSPSEA LVMQDLQELD DPQIVQSLAE
VLASPVSAVN PPAQTTPGSL LPPPADEEPV DDELREVFLE ETGEVLEVLS EYLPRWSAEP
DDRAALSELR RAFHTLKGSG RMVRALVLGE LAWAVENLLN RVLENSVEPG PAVRQLLADT
LLLLPDLIAE FATNGQRQRH DVDQLAARAH ALAKGDTPLP AEDVEDVAAL DPLLLEIFRN
EAETHLASLN RFLDQAAEHV PLQASDELQR ALHTLKGSAS MAGVSPIAEL AAPLDKLARE
FKAHQLALDL DEVELLLEAE GLFRVGLRQL KHDPLAPIVG AQSLIKRTET LLGERLESIL
NAPSSAVRVK RDPQLINNFL AQGMDILLDA ENLLQRWQQH PGERQELSAL LDELTTLGEA
AHLADLLPVD VLCEALLDLY GAVEESSLAV SERFFHEAQQ AHEALINMLD ELAAGQEITP
QPQRIRALHE LLDESLDPSS MGLIRSDGSR TLSIRELGSA TAELQQHSAD SGPDDEIVEI
FLEEAVDILD SAGQALQRWL KDPENGAPLS SLQRDLHTLK GGARMAEVTA VGDLAHELEG
LYEGLVDRRY SHSEALDRLL RQSHERLAQF LEQLHRHQPL DPAQDLIEAI RRFRQGPSAS
PETPTASVTQ DGPGHDPELL EIFLEEGFDI IENSGAALLR WQAEPGNRQE VETLLRDLHT
LKGGARMVEI GPIGDLAHEL EYLYESLSAG TLQGSAELFA LLQRGQDRLA QMLDAVRAGQ
PCPPADRLIS AIQNFSHPLV VQTPAPVPSV AVKVEPAAPA PEAGADMVKV SAELLDDLVN
LAGETSIFRG RIEQQVSDAQ TALHEMETTI ERMRDQLRRL DTETQGRILS RQQVDAERLG
YEDFDPLEMD RHSQLQQLSR ALFESASDLL DLKETLDRRT HDAENLLQQQ GRINTELQEG
LMRTRMVPFE RMLPRLKRIV RQVAEELGKD VAFSVGNAEG EMDRNVLERM AAPLEHMLRN
AVDHGLESAE VRLAAGKPAQ GQISLDLSRE GGDIVFDIRD DGAGVPLDAV RHKAIKRGLL
APDAEISDRE VLQFILQPGF STAEKITQIS GRGVGMDVVH EEVRQLGGTM SIDSVPGQGV
HFRIRLPFTV SVNRALMVQC GEDQYAIPLN TIDGIVRVLP NELDGHFRLD PPSYQYGGQR
YELCYLGELL KTAPRPKLSG QSLPVPVLLV QCNDRHIAVQ VDTMAGTREI VVKSLGPQFA
SVQGVSGATI LGDGRVVLIL DLLAPIRAMQ ARLPQRPTSH EIESEPQKPL LVMVVDDSVT
VRKVTSRLLE RHGMNVLTAK DGVDAMLLLE EHMPDLMLLD IEMPRMDGFE VATQVRHDER
LQHLPIIMIT SRTGQKHRDR AMAIGVNDYL GKPYQESVLL ESIALWSKKH A
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