Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5288 |
Symbol | |
ID | 3715184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5951311 |
End bp | 5952030 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_351016 |
Protein GI | 77461509 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.448814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGT CCCGCTTCTT TATCGACGCC CCGCTCAGCA CCGGCGAACA CGAACTGCCG GAAGCCCAGG CGCATTACAT CAGCCGCGTG CTGCGCATGG CCGAGGGCGA TGCGGTGCAG TTGTTCGACG GTTCAGGCCA CGAGTTTCGC GGCTCCCTGG TGGAAGTCGG CAAGAAACGC GTGGTGGTGC AGATCGACGA GCAGTTCGCC GGTCAGGTCG AATCGCCGCT GAAGATCCAC CTCGGCCAGG GCCTGTCCCG CGGCGAACGG ATGGACTGGG CAATCCAGAA AGCCACCGAA CTGGGCGTGA CTGAAATCAC CCCGATCTTC AGCGAGCGCT GCGAAGTCCG GCTCAAGGAC GAACGCGCCG ACAAACGCCT GCTGCACTGG CGCCAAGTGG CGATCAGCGC TTGCGAGCAA TGCGGTCGCT CGCGAGTGCC AGTGATTCAT CCACCGGTGC TGCTGGCCGA CTGGCTGAAG CAGACCGAAG CCGAACTGAA ACTGGTGCTG CACCCGGTGG CCGAGCCGCT GGTCAGCCAT GCAAAACCAT CGACCCTGGC GTTCCTGATC GGCCCGGAAG GCGGTTTGTC CGACGCCGAA GTCGAGCAAG CCAAGGCCGG CGGCTTCCAC GCCGCCCGCC TCGGCCCGCG CGTGCTGCGC ACCGAAACTG CGCCGGTTGT GGCGCTGGCG GTGGCGCAGC AACTGTGGGG TGATTTCTAA
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Protein sequence | MRLSRFFIDA PLSTGEHELP EAQAHYISRV LRMAEGDAVQ LFDGSGHEFR GSLVEVGKKR VVVQIDEQFA GQVESPLKIH LGQGLSRGER MDWAIQKATE LGVTEITPIF SERCEVRLKD ERADKRLLHW RQVAISACEQ CGRSRVPVIH PPVLLADWLK QTEAELKLVL HPVAEPLVSH AKPSTLAFLI GPEGGLSDAE VEQAKAGGFH AARLGPRVLR TETAPVVALA VAQQLWGDF
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