Gene Pfl01_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5288 
Symbol 
ID3715184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5951311 
End bp5952030 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_351016 
Protein GI77461509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.448814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT CCCGCTTCTT TATCGACGCC CCGCTCAGCA CCGGCGAACA CGAACTGCCG 
GAAGCCCAGG CGCATTACAT CAGCCGCGTG CTGCGCATGG CCGAGGGCGA TGCGGTGCAG
TTGTTCGACG GTTCAGGCCA CGAGTTTCGC GGCTCCCTGG TGGAAGTCGG CAAGAAACGC
GTGGTGGTGC AGATCGACGA GCAGTTCGCC GGTCAGGTCG AATCGCCGCT GAAGATCCAC
CTCGGCCAGG GCCTGTCCCG CGGCGAACGG ATGGACTGGG CAATCCAGAA AGCCACCGAA
CTGGGCGTGA CTGAAATCAC CCCGATCTTC AGCGAGCGCT GCGAAGTCCG GCTCAAGGAC
GAACGCGCCG ACAAACGCCT GCTGCACTGG CGCCAAGTGG CGATCAGCGC TTGCGAGCAA
TGCGGTCGCT CGCGAGTGCC AGTGATTCAT CCACCGGTGC TGCTGGCCGA CTGGCTGAAG
CAGACCGAAG CCGAACTGAA ACTGGTGCTG CACCCGGTGG CCGAGCCGCT GGTCAGCCAT
GCAAAACCAT CGACCCTGGC GTTCCTGATC GGCCCGGAAG GCGGTTTGTC CGACGCCGAA
GTCGAGCAAG CCAAGGCCGG CGGCTTCCAC GCCGCCCGCC TCGGCCCGCG CGTGCTGCGC
ACCGAAACTG CGCCGGTTGT GGCGCTGGCG GTGGCGCAGC AACTGTGGGG TGATTTCTAA
 
Protein sequence
MRLSRFFIDA PLSTGEHELP EAQAHYISRV LRMAEGDAVQ LFDGSGHEFR GSLVEVGKKR 
VVVQIDEQFA GQVESPLKIH LGQGLSRGER MDWAIQKATE LGVTEITPIF SERCEVRLKD
ERADKRLLHW RQVAISACEQ CGRSRVPVIH PPVLLADWLK QTEAELKLVL HPVAEPLVSH
AKPSTLAFLI GPEGGLSDAE VEQAKAGGFH AARLGPRVLR TETAPVVALA VAQQLWGDF