Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5278 |
Symbol | |
ID | 3715346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5939076 |
End bp | 5939963 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | formate/nitrate transporter |
Protein accession | YP_351006 |
Protein GI | 77461499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC CAACAGACGG CAAGACCCCC GATCTCTCGG CCAAGGAACA GCACGAAGTC GAGAAAAACC AGCCGCCCCG CGCGGCGGTT CTGCATGAAA TCATCCGCAA ACAGGGCGAC CAGGAACTGG AGCGCAGCAT CGCCGCGCTG TGGTGGTCGG CGCTCGCGGC CGGGCTGACC ATGGGCCTGT CGCTGATGGG CATGGGCCTG CTCAACTCGC GTCTGCCCGA GGGCGACGAA TTCAAGGTGA TCGCCAGTTT CGGCTACTGC GCAGGCTTTC TCGCGGTGAT CCTCGCCCGC CAGCAACTGT TTACCGAAAA CACCCTGACT GCTGTGCTGC CGGTGATGAC CAAACCGACC CTGGCCAATT TCGGCCGGTT GATCCGGCTG TGGACGGTGG TGCTGTTCGG CAACCTGTGC GGGACGATTC TGGTGGCCTA CGTGATGCTC GAACTGCCGA TCTTCGACAG CAAGACTGAC GTAGCCTTCC TCGAAATCGG CCGCAAGGTC ATGGAAAACC ACGCGAGTCA GATGTTCGCC AAGGGCATCG TCTCGGGCTG GATGATTGCC ACCATGGTCT GGATGATTCC GTCCATGGAG AGCGCGAAGA TGTGGATCAT CATCCTCATC ACCTATCTGA TGGCACTGGG CGATTTCACG CACATCGTGG TGGGGTCGGC GGAGGTGTCG TATCTGGTGT TTGCCGGCGA GTTGCCGTGG AGTGACTTCT GGGCGGTGTT CGCCGGGCCG ACCCTGGCGG GGAACATCAT CGGCGGCAGT TTCATCTTCG CCCTGATCAG TCATGCGCAG ATCCGCAGTG AAAGCGGAAA GCCGAAAGAG TCTGCGGATC AGGCCGAAAA GCCCGATCCG CAGCAGATCA AGAAATGA
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Protein sequence | MTTPTDGKTP DLSAKEQHEV EKNQPPRAAV LHEIIRKQGD QELERSIAAL WWSALAAGLT MGLSLMGMGL LNSRLPEGDE FKVIASFGYC AGFLAVILAR QQLFTENTLT AVLPVMTKPT LANFGRLIRL WTVVLFGNLC GTILVAYVML ELPIFDSKTD VAFLEIGRKV MENHASQMFA KGIVSGWMIA TMVWMIPSME SAKMWIIILI TYLMALGDFT HIVVGSAEVS YLVFAGELPW SDFWAVFAGP TLAGNIIGGS FIFALISHAQ IRSESGKPKE SADQAEKPDP QQIKK
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