Gene Pfl01_5278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5278 
Symbol 
ID3715346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5939076 
End bp5939963 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content60% 
IMG OID 
Productformate/nitrate transporter 
Protein accessionYP_351006 
Protein GI77461499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CAACAGACGG CAAGACCCCC GATCTCTCGG CCAAGGAACA GCACGAAGTC 
GAGAAAAACC AGCCGCCCCG CGCGGCGGTT CTGCATGAAA TCATCCGCAA ACAGGGCGAC
CAGGAACTGG AGCGCAGCAT CGCCGCGCTG TGGTGGTCGG CGCTCGCGGC CGGGCTGACC
ATGGGCCTGT CGCTGATGGG CATGGGCCTG CTCAACTCGC GTCTGCCCGA GGGCGACGAA
TTCAAGGTGA TCGCCAGTTT CGGCTACTGC GCAGGCTTTC TCGCGGTGAT CCTCGCCCGC
CAGCAACTGT TTACCGAAAA CACCCTGACT GCTGTGCTGC CGGTGATGAC CAAACCGACC
CTGGCCAATT TCGGCCGGTT GATCCGGCTG TGGACGGTGG TGCTGTTCGG CAACCTGTGC
GGGACGATTC TGGTGGCCTA CGTGATGCTC GAACTGCCGA TCTTCGACAG CAAGACTGAC
GTAGCCTTCC TCGAAATCGG CCGCAAGGTC ATGGAAAACC ACGCGAGTCA GATGTTCGCC
AAGGGCATCG TCTCGGGCTG GATGATTGCC ACCATGGTCT GGATGATTCC GTCCATGGAG
AGCGCGAAGA TGTGGATCAT CATCCTCATC ACCTATCTGA TGGCACTGGG CGATTTCACG
CACATCGTGG TGGGGTCGGC GGAGGTGTCG TATCTGGTGT TTGCCGGCGA GTTGCCGTGG
AGTGACTTCT GGGCGGTGTT CGCCGGGCCG ACCCTGGCGG GGAACATCAT CGGCGGCAGT
TTCATCTTCG CCCTGATCAG TCATGCGCAG ATCCGCAGTG AAAGCGGAAA GCCGAAAGAG
TCTGCGGATC AGGCCGAAAA GCCCGATCCG CAGCAGATCA AGAAATGA
 
Protein sequence
MTTPTDGKTP DLSAKEQHEV EKNQPPRAAV LHEIIRKQGD QELERSIAAL WWSALAAGLT 
MGLSLMGMGL LNSRLPEGDE FKVIASFGYC AGFLAVILAR QQLFTENTLT AVLPVMTKPT
LANFGRLIRL WTVVLFGNLC GTILVAYVML ELPIFDSKTD VAFLEIGRKV MENHASQMFA
KGIVSGWMIA TMVWMIPSME SAKMWIIILI TYLMALGDFT HIVVGSAEVS YLVFAGELPW
SDFWAVFAGP TLAGNIIGGS FIFALISHAQ IRSESGKPKE SADQAEKPDP QQIKK