Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5277 |
Symbol | |
ID | 3715345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5937810 |
End bp | 5939075 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_351005 |
Protein GI | 77461498 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC TCGTCGCCGC TTTCATCTGC CTCACCACCC TCCTCACCTT TGTGAATTTC CGCTTCATCG GCCTGCCCCC GACCATCGGC GTGATGGTTA CCGCGCTGAT GTTTTCCCTG TTGCTGCAAG GCCTGAGCCT GCTCGGCTAC CCCGGTCTCG AAGAGCGCGT ACAGCAACTG ATCGGCCAGA TCGACTTCGG CGATCTGCTG ATGAACTGGA TGCTCTCGTT CCTGCTGTTC GCCGGTGCGT TGCACGTGAA CCTCAACGAC CTGCGCAGTT ACCGCTGGCC CATCGGCCTG CTGGCGACCT TCGGCGTATT GATCGCCACC GCCGTGATCG GCAGCCTCGC CTACTACATC TTCGCCCTGT TCGGCTGGCA CGTGAGCTTC CTCTACTGCC TGTTGTTCGG CGCGCTGATT TCCCCGACCG ACCCGATCGC GGTACTCGGC GTGCTGCGTA CGGCCAATGC CTCGAAGCCG CTGAAGACCA CCATCGTCGG CGAATCGCTG TTCAACGACG GCACCGCCGT GGTGGTGTTC ACCGTGTTGC TGGGCATCGC GCAACTGGGC GAAACCCCGA CCGTCGGCGC CACGGCCATG CTGTTTGCCC ATGAAGCCAT CGGCGGCGTG CTGTTCGGCG GGCTGATCGG TTATCTGGTG TACCTGATGA TCAAGAGCAT CGAGCAGCAC CAGATCGAAG TCATGCTGAC CCTGGCGCTG GTGATCGGCG GTTCGGCGAT GGCCACCGAG CTGCACGTCT CGGCGCCGAT TGCGATGGTG GTTGCCGGGC TGATCATCGG TAACTTGGGT CGCAACCTGG CGATGAACGA CATGACCCGC AAATACCTGG ACGGTTTCTG GGAATTGCTC GACGACATGC TCAACGCCCT GCTGTTCGCG CTGATCGGGA TGGAGCTGTT GCTGCTGCCG TTCAACTGGC TGCACGTGGC GGCGGCAAGC CTGCTGGCGC TGGCGATTCT GCTGTCGCGC CTGCTCACCG TGGCCCCGGC CATCGTCTTG CTGCGGCGCT GGCGCACCGT GCCGCGCGGC ACTATCCGGA TCCTGACCTG GGGTGGATTG CGCGGCGGTG TGTCGGTGGC ACTGGCACTG GCCCTGCCGT TGGGCCCGGA GCGCGATCTG CTGCTGAGCA TCACCTACAT CGTGGTGCTG TCATCGATCC TGTTGCAGGG CCTGACCATC GGCAAACTGG TCAAGCACGC AACGCGCGAC GAGCCGGCGA GCGCTGCCGA GCCCGCGCAC CATTGA
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Protein sequence | MLELVAAFIC LTTLLTFVNF RFIGLPPTIG VMVTALMFSL LLQGLSLLGY PGLEERVQQL IGQIDFGDLL MNWMLSFLLF AGALHVNLND LRSYRWPIGL LATFGVLIAT AVIGSLAYYI FALFGWHVSF LYCLLFGALI SPTDPIAVLG VLRTANASKP LKTTIVGESL FNDGTAVVVF TVLLGIAQLG ETPTVGATAM LFAHEAIGGV LFGGLIGYLV YLMIKSIEQH QIEVMLTLAL VIGGSAMATE LHVSAPIAMV VAGLIIGNLG RNLAMNDMTR KYLDGFWELL DDMLNALLFA LIGMELLLLP FNWLHVAAAS LLALAILLSR LLTVAPAIVL LRRWRTVPRG TIRILTWGGL RGGVSVALAL ALPLGPERDL LLSITYIVVL SSILLQGLTI GKLVKHATRD EPASAAEPAH H
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