Gene Pfl01_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5277 
Symbol 
ID3715345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5937810 
End bp5939075 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content64% 
IMG OID 
ProductSodium/hydrogen exchanger 
Protein accessionYP_351005 
Protein GI77461498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TCGTCGCCGC TTTCATCTGC CTCACCACCC TCCTCACCTT TGTGAATTTC 
CGCTTCATCG GCCTGCCCCC GACCATCGGC GTGATGGTTA CCGCGCTGAT GTTTTCCCTG
TTGCTGCAAG GCCTGAGCCT GCTCGGCTAC CCCGGTCTCG AAGAGCGCGT ACAGCAACTG
ATCGGCCAGA TCGACTTCGG CGATCTGCTG ATGAACTGGA TGCTCTCGTT CCTGCTGTTC
GCCGGTGCGT TGCACGTGAA CCTCAACGAC CTGCGCAGTT ACCGCTGGCC CATCGGCCTG
CTGGCGACCT TCGGCGTATT GATCGCCACC GCCGTGATCG GCAGCCTCGC CTACTACATC
TTCGCCCTGT TCGGCTGGCA CGTGAGCTTC CTCTACTGCC TGTTGTTCGG CGCGCTGATT
TCCCCGACCG ACCCGATCGC GGTACTCGGC GTGCTGCGTA CGGCCAATGC CTCGAAGCCG
CTGAAGACCA CCATCGTCGG CGAATCGCTG TTCAACGACG GCACCGCCGT GGTGGTGTTC
ACCGTGTTGC TGGGCATCGC GCAACTGGGC GAAACCCCGA CCGTCGGCGC CACGGCCATG
CTGTTTGCCC ATGAAGCCAT CGGCGGCGTG CTGTTCGGCG GGCTGATCGG TTATCTGGTG
TACCTGATGA TCAAGAGCAT CGAGCAGCAC CAGATCGAAG TCATGCTGAC CCTGGCGCTG
GTGATCGGCG GTTCGGCGAT GGCCACCGAG CTGCACGTCT CGGCGCCGAT TGCGATGGTG
GTTGCCGGGC TGATCATCGG TAACTTGGGT CGCAACCTGG CGATGAACGA CATGACCCGC
AAATACCTGG ACGGTTTCTG GGAATTGCTC GACGACATGC TCAACGCCCT GCTGTTCGCG
CTGATCGGGA TGGAGCTGTT GCTGCTGCCG TTCAACTGGC TGCACGTGGC GGCGGCAAGC
CTGCTGGCGC TGGCGATTCT GCTGTCGCGC CTGCTCACCG TGGCCCCGGC CATCGTCTTG
CTGCGGCGCT GGCGCACCGT GCCGCGCGGC ACTATCCGGA TCCTGACCTG GGGTGGATTG
CGCGGCGGTG TGTCGGTGGC ACTGGCACTG GCCCTGCCGT TGGGCCCGGA GCGCGATCTG
CTGCTGAGCA TCACCTACAT CGTGGTGCTG TCATCGATCC TGTTGCAGGG CCTGACCATC
GGCAAACTGG TCAAGCACGC AACGCGCGAC GAGCCGGCGA GCGCTGCCGA GCCCGCGCAC
CATTGA
 
Protein sequence
MLELVAAFIC LTTLLTFVNF RFIGLPPTIG VMVTALMFSL LLQGLSLLGY PGLEERVQQL 
IGQIDFGDLL MNWMLSFLLF AGALHVNLND LRSYRWPIGL LATFGVLIAT AVIGSLAYYI
FALFGWHVSF LYCLLFGALI SPTDPIAVLG VLRTANASKP LKTTIVGESL FNDGTAVVVF
TVLLGIAQLG ETPTVGATAM LFAHEAIGGV LFGGLIGYLV YLMIKSIEQH QIEVMLTLAL
VIGGSAMATE LHVSAPIAMV VAGLIIGNLG RNLAMNDMTR KYLDGFWELL DDMLNALLFA
LIGMELLLLP FNWLHVAAAS LLALAILLSR LLTVAPAIVL LRRWRTVPRG TIRILTWGGL
RGGVSVALAL ALPLGPERDL LLSITYIVVL SSILLQGLTI GKLVKHATRD EPASAAEPAH
H