Gene Pfl01_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5272 
Symbol 
ID3715340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5933260 
End bp5933709 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content58% 
IMG OID 
Productcytochrome c, class II 
Protein accessionYP_351000 
Protein GI77461493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.400589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTA AACGAATTTC TGTTGTATTG CTGGCCTGTC TGACCTTGTC CGCCTGTGGC 
GGTGTCGACC CGAATTCCCC GCTGGGTCAG CGCAAGGCAA TCTTCAAGCA GATGCTCAAG
ACCGGCGAAG ACCTGGGCGG CATGCTGCGC GGACGCATTG CCTTCGACGG GCCGAAATTT
GCGGAAGGTG CGGTCAAGCT CGATGCGTTG TCCCATGAGC CGTGGAAACA TTTCCCGCAG
GTGCGCGAAG AAGATCACAC CAGCGCCAAG GACGATGTAT GGCAGAAACA GGCGCGCTTC
CAGGAAATGG CCCGCAGCCT TGAAGCGGCT ACCGGTGAAC TGGTGATCGC CAGCAAGGTT
CAACCCTACA AGGCCAGTAA CCTGGGGCCG GCCGTGCAGA AAGTCGAAGA TGCCTGCAGT
GCCTGCCATA AAGAGTTTCG CGACCACTGA
 
Protein sequence
MTLKRISVVL LACLTLSACG GVDPNSPLGQ RKAIFKQMLK TGEDLGGMLR GRIAFDGPKF 
AEGAVKLDAL SHEPWKHFPQ VREEDHTSAK DDVWQKQARF QEMARSLEAA TGELVIASKV
QPYKASNLGP AVQKVEDACS ACHKEFRDH