| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5267 |
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| Symbol | |
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| ID | 3715777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5926451 |
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| End bp | 5928496 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | transketolase |
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| Protein accession | YP_350995 |
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| Protein GI | 77461488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCT TTTTCCGTTT CAATCTATTC ACACCCAGGA GATCAGCGAT GCCTAGCCGT
CGTGAGCGTG CCAACGCCAT TCGTGCCCTC AGCATGGATG CCGTGCAAAA AGCCAACAGC
GGCCATCCCG GTGCCCCTAT GGGTATGGCA GATATCGCCG AAGTGCTTTG GCGCGACTAC
CTCAAGCACA ACCCGAGCAA TCCATTGTTC GCCGACCGTG ACCGCTTTGT GCTGTCCAAC
GGCCACGGCT CGATGTTGAT CTACTCGCTG CTGCACCTGA CCGGTTACGA CCTGTCGATC
GACGATCTGA AGCAATTCCG TCAACTGCAC AGCCGTACCC CGGGTCACCC GGAATTCGGT
TACACCCCGG GCGTTGAAAC CACCACCGGC CCGCTGGGTC AGGGTCTGGC CAACGCCGTG
GGCTTCGCCT TGGCAGAAAA AGTCCTGGGC GCGCAGTTCA ACCGTCCTGG CCACAACATC
GTCGACCACC ACACCTACGT GTTCCTGGGT GATGGCTGCA TGATGGAAGG CATTTCCCAC
GAAGTCGCTT CCCTGGCCGG TACCCTGGGC CTGGGCAAGC TGATTGCCTT CTACGATGAC
AACGGCATCT CCATCGACGG CGAAGTCGAA GGCTGGTTCA CCGACGACAC GCCGAAGCGT
TTCGAATCGT ACAACTGGCA AGTGATCCGC AACGTCGACG GTCACGACCC GGAAGAGATC
AAGACCGCCA TCGAGACCGC TCGCAAGAGC CCGCTGCCGA CCCTGATCTG CTGCAAGACC
ACCATCGGTT TCGGTTCGCC GAACAAGCAA GGCAAGGAAG ATTGCCACGG CGCCCCGCTG
GGTGACGCGG AAATCGCCCT GACCCGTCAG GCGCTGAACT GGAACCACGG CCCGTTCGAA
ATCCCGGCCG ACATCTATGC CGAGTGGGAT GCCAAGGAAA AAGGCCGCGC CGCCGAAGCC
GAGTGGGATC AGCGTTTCGC TGCCTACTCC GCCGCGTTCC CGACCGAAGC CAACGAACTG
ATCCGTCGCC TGAGCGGCGA GCTGCCGGCC GACTTCTCCG AGAAGGCCGA TGCCTACATC
GCTGAAGTCG CGGCCAAAGG CGAAACCATC GCCAGCCGTA AAGCCAGCCA GAACGCCCTG
AACGCGTTCG GCCCGCTGCT GCCGGAAGTG CTGGGCGGTT CGGCTGACCT GGCCGGTTCC
AACCTGACCC TGTGGAAAGG CTGCAAAGGC GTCAGCGCCG AAGACGCCAG CGGCAACTAC
ATGTACTACG GCGTGCGCGA ATTCGGCATG ACCGCGATCA TGAACGGCGT TGCCCTGCAC
GGCGGTCTGG TGCCTTACGG CGCGACCTTC CTGATGTTCA TGGAATACGC CCGCAACGCC
GTGCGCATGT CCGCTCTGAT GAAGCAGCGT GTGATCCACG TCTACACCCA CGACTCCATC
GGTCTGGGCG AAGACGGCCC GACGCACCAG CCGATCGAGC AACTGACCAG CCTGCGCAGC
ACGCCGAACC TCGACACCTG GCGTCCAGCC GATGCCGTTG AATCGGCCGT GGCCTGGAAA
AACGCTCTGG AGCGCAAGGA CGGCCCGTCG GCGCTGATCT TCTCGCGTCA GAACCTGCAG
CACCAAACCC GTGATGCCGG CCAGATCGCC GACATCCGTC GTGGTGGTTA TGTGCTGAAG
GACTGCGCAG GCGAGCCTGA GCTGATTCTG ATCGCCACCG GTTCGGAAGT TGGTCTGGCC
GTTCAGGCCT ACGACAAACT CACCGAGCAG GGCCGCAAGG TGCGCGTGGT TTCCATGCCA
TGCACCAGCG CGTTCGACGC TCAGGACGCC AGCTACAAGC AATCGGTCCT GCCGTTGCAG
GTTGGCGCGC GTATCGCGAT CGAAGCGGCT CACGCCGACT TCTGGTTCAA GTACGTGGGT
CTGGAAGGTC GCGTGATCGG CATGACCACC TACGGCGAAT CGGCTCCGGC TTCGGCACTG
TTCGAAGAGT TCGGCTTCAC CCTGGAAAAC ATCCTGGGTC AGGCTGAAGA GCTGCTGGAA
GACTGA
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| Protein sequence | MPSFFRFNLF TPRRSAMPSR RERANAIRAL SMDAVQKANS GHPGAPMGMA DIAEVLWRDY
LKHNPSNPLF ADRDRFVLSN GHGSMLIYSL LHLTGYDLSI DDLKQFRQLH SRTPGHPEFG
YTPGVETTTG PLGQGLANAV GFALAEKVLG AQFNRPGHNI VDHHTYVFLG DGCMMEGISH
EVASLAGTLG LGKLIAFYDD NGISIDGEVE GWFTDDTPKR FESYNWQVIR NVDGHDPEEI
KTAIETARKS PLPTLICCKT TIGFGSPNKQ GKEDCHGAPL GDAEIALTRQ ALNWNHGPFE
IPADIYAEWD AKEKGRAAEA EWDQRFAAYS AAFPTEANEL IRRLSGELPA DFSEKADAYI
AEVAAKGETI ASRKASQNAL NAFGPLLPEV LGGSADLAGS NLTLWKGCKG VSAEDASGNY
MYYGVREFGM TAIMNGVALH GGLVPYGATF LMFMEYARNA VRMSALMKQR VIHVYTHDSI
GLGEDGPTHQ PIEQLTSLRS TPNLDTWRPA DAVESAVAWK NALERKDGPS ALIFSRQNLQ
HQTRDAGQIA DIRRGGYVLK DCAGEPELIL IATGSEVGLA VQAYDKLTEQ GRKVRVVSMP
CTSAFDAQDA SYKQSVLPLQ VGARIAIEAA HADFWFKYVG LEGRVIGMTT YGESAPASAL
FEEFGFTLEN ILGQAEELLE D
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