| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5256 |
|---|
| Symbol | |
|---|
| ID | 3715766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5918226 |
|---|
| End bp | 5918894 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | lyase, putative |
|---|
| Protein accession | YP_350984 |
|---|
| Protein GI | 77461477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TCGCAACCTG GAACCTCAGC GTTCCCGTTG GCAGCCCGCC CTACACCGTC
GAAACCTCCA AACTGGTGAA CGGCTTCAAG GATCAGTACT TCCATTCCGA CACCGGCACC
CTGTTCTTCT GGTCCCCGGT GACCGGTTCG AAAACCGAAA ACGCCATCTA CCCGCGCACC
GAACTGCGCG AGACCTACAG CAATGGAACG CTGCGCAACT GGTATTACCC CGACGCCGAC
AACCTGCTGC GCGCGACCCT CTCGGTCAAC AAGGTGCCCA GCTCCGGCAA GATCGTCATC
GGCCAGATCC ACGCCTATGA AAGCCAGAAG CCGATGCTTA AGCTTGAATA CCAATACAAA
GAAAAAACCG AGACCGGCAA CCTGGTGATC AAGTTGCGCA CCCATCCGGA TCAGGACGAA
AGCCGGGTCA TCACCCTCGC CACCGGGATC AAACTCAATC GCGAGTTCAA CTACCTCATT
CACCTGAGCC CCGGCGGTGC ACTGGGCGTG AGTGCGGCCG GGTATCAGTG GGATTCGCAG
ATCAGCGCGA CGTGGCGCAA CAAACCGCTG TATTTCAAGG CGGGCGTGTA TGTGCAGGAC
AACACCGGGT ACACCAGCGA GGGTGGGCAG GTGACGTTCT CAAAACTGGA CATTGACCAC
GACAAATAA
|
|---|
| Protein sequence | MIDLATWNLS VPVGSPPYTV ETSKLVNGFK DQYFHSDTGT LFFWSPVTGS KTENAIYPRT
ELRETYSNGT LRNWYYPDAD NLLRATLSVN KVPSSGKIVI GQIHAYESQK PMLKLEYQYK
EKTETGNLVI KLRTHPDQDE SRVITLATGI KLNREFNYLI HLSPGGALGV SAAGYQWDSQ
ISATWRNKPL YFKAGVYVQD NTGYTSEGGQ VTFSKLDIDH DK
|
|---|
| |