Gene Pfl01_5251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5251 
Symbol 
ID3715761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5913408 
End bp5914145 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_350979 
Protein GI77461472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAT TGCATCGAGC CTTTGCTTTG ATCGGATTGC TGTTGCTGGG TCAAAGCGCT 
GCAGCGGAGA AATTGCGTCT GGTGTTCGAC GTCTGGCCGC CCTTTACCGA TGACACGCTG
GTCAACGGTG GGCTGGCGAC CGATATCGTC AGCACGGCCC TGGCTCGTGC CGGTTATGCC
AGCGGTTACG AGCAGGTGCC GTGGGCGCGC GCGTTGATGG GGGTTGGCGA AGGACGTTAC
GACGTGCTGG TCAACGCCTG GTACAACGAC GAGCGCACGA AGCTGGGGCA GTTTTCCGCC
GAGTACCTGC TCAATCGCGT GCGCTTCCTC AAGCGCAAGG ACGCACCCAT CGAATACAAC
AACCTGCAGG AACTGCACAC CTATCCGATT GCAGTGGTGC GCGGCTACGC CTATTCGGCG
CCGTTCGATG CTGACTCCGC GTTGCAGAAA GTCCCTGTGC ATAACTTTGC CATGGCCGTG
CGCATGCTGG CGGCGGACCG GGTCAAGCTG ACCTTGGAAG ACGAATACGT CGCCCGCTAT
TACCTGGCCC GGGAATCACC GAAAGTGCGC AACGCGGTGG AGTTTCTGCC CAAGCCGCTG
AGCGAGAACA GCCTGCACAT CCTGGTCAGC CTGAAGAACC CGCAGCACGA ACAGATCGTG
GCCGGGTTCG ACAAGGCGAT TGCATCGATG AAGGCCGATG GCAGCTATGA CAAGCTGCTC
AGGCAACACG GCATGTGA
 
Protein sequence
MPRLHRAFAL IGLLLLGQSA AAEKLRLVFD VWPPFTDDTL VNGGLATDIV STALARAGYA 
SGYEQVPWAR ALMGVGEGRY DVLVNAWYND ERTKLGQFSA EYLLNRVRFL KRKDAPIEYN
NLQELHTYPI AVVRGYAYSA PFDADSALQK VPVHNFAMAV RMLAADRVKL TLEDEYVARY
YLARESPKVR NAVEFLPKPL SENSLHILVS LKNPQHEQIV AGFDKAIASM KADGSYDKLL
RQHGM