| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5248 |
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| Symbol | |
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| ID | 3716199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5908288 |
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| End bp | 5909724 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_350976 |
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| Protein GI | 77461469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.748721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAGAG GCTGCTACAC TGCGCGACAT TTTGTTTTGC AGGCCAGTCC CGTGACCACC
ATCGCCACCG CTTTTAATAC TTTGCCGCTG TCCGCCGCCA TGCTGGCTAA CCTCGACTCC
CTCGGTTATG CCCAGATGAC GCCGATCCAG GCGCAGAGCT TGCCGGTGAT CCTCAAGGGG
ATGGACCTGA TCGCCCAGGC CAAGACCGGC AGCGGCAAGA CTGCCGCGTT CGGTATCGGC
CTGCTGAACC CGATCAATCC GCGCTACTTC GGTTGCCAGG CGCTGGTAAT TTGCCCGACT
CGCGAACTGG CTGACCAGGT CGCCAAGGAA ATCCGCCGTC TGGCCCGTGC CGAAGACAAC
ATCAAGGTCC TGACCCTGTG CGGCGGCGTG TCCTTCGGCC CGCAGATCGG CTCGCTGGAG
CACGGCGCGC ACATCATCGT CGGCACCCCG GGCCGCATCC AGCAGCACCT GCGCAAGGGT
TCGCTGGTCC TCGACGGCCT CAACACGCTG ATCCTCGACG AAGCCGACCG CATGCTCGAC
ATGGGTTTCT ACGACGCCAT CGAAGACATC ATCGAGCAGA CCCCGGCCCG TCGTCAGACC
CTGCTGTTCT CGGCGACCTA CCCGGTGGGC ATCAAGCAAC TGGCGTCGAA GTTCATGCGC
GATCCGCAAA CGGTCAAGGC CGAAGCGTTC CACGACGATA CCCAGATCGA GCAGCGCTTC
TACGAGATTT CTCCGGAAGA GCGCATGAGT GCGGTGACCA AGGTTCTGCA CCACTTCCGT
CCGGCCTCCA CCGTGGCGTT CTGCTTCACC AAGCAGCAAG TGCAGGAAAC TGTCGATCAC
CTGACCTCCA AAGGCATTTC CGCCGTCGGC CTGCACGGCG ATCTGGAGCA GCGTGACCGC
GATCAGGTGT TGGCGATGTT CGCCAACCGC AGTACTTCGG TACTGGTTGC CACCGACGTT
GCCGCCCGTG GTCTGGACAT TGATGCACTG GACATGGTGA TCAACGTCGA ACTGGCCCGC
GACTCGGAAA TCCACATTCA CCGTGTTGGC CGTACCGGTC GTGCCGGCGA GAAAGGCATC
GCGGTCAGCC TGGTGGCGCC GTCCGAAGCG CACCGCGCGC AAGCCATCGA ACAACTGCAG
AAGACCCCGC TGAACTGGGA TCAGGTGGAC AACCTCAAGT CCCAGGGCGG TGCCCCGCTG
CAACCGCCGA TGAGCACGCT GTGCATCGCT GGCGGCCGGA AAGACAAGGT ACGTCCGGGC
GACATTCTTG GCGCACTGAC CGGTGAGGCC GGCATTCCGG GCGCCCAGGT CGGCAAGATC
GCGATCTTTG ACTTCCAGTC CTATGTGGCC GTCGAGCGCA CCGTGGTCAT GCAGGCGCTG
CAGCGTTTGA ACAACGGCAA GATCAAGGGT CGTTCGCTGC GCGTCCGGGT TTTGTAA
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| Protein sequence | MARGCYTARH FVLQASPVTT IATAFNTLPL SAAMLANLDS LGYAQMTPIQ AQSLPVILKG
MDLIAQAKTG SGKTAAFGIG LLNPINPRYF GCQALVICPT RELADQVAKE IRRLARAEDN
IKVLTLCGGV SFGPQIGSLE HGAHIIVGTP GRIQQHLRKG SLVLDGLNTL ILDEADRMLD
MGFYDAIEDI IEQTPARRQT LLFSATYPVG IKQLASKFMR DPQTVKAEAF HDDTQIEQRF
YEISPEERMS AVTKVLHHFR PASTVAFCFT KQQVQETVDH LTSKGISAVG LHGDLEQRDR
DQVLAMFANR STSVLVATDV AARGLDIDAL DMVINVELAR DSEIHIHRVG RTGRAGEKGI
AVSLVAPSEA HRAQAIEQLQ KTPLNWDQVD NLKSQGGAPL QPPMSTLCIA GGRKDKVRPG
DILGALTGEA GIPGAQVGKI AIFDFQSYVA VERTVVMQAL QRLNNGKIKG RSLRVRVL
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