Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5246 |
Symbol | |
ID | 3716197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5905308 |
End bp | 5906645 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350974 |
Protein GI | 77461467 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.575633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.417137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATTT CCAAGAACCC GTCCGAGGCG TTCAAGGTGC TGGTCAACTG GCTGCGCGAT GCCGTGCGCG AGCCGGAACA GTTCACCCTG AGTTACGACG CCGAATCGTC GGCCTTCGTC CGTTTCAACC ACGCCAAGGT GCGTCAGGCC GGGCAAGTTC AGCAAGCCGG TATCGGTCTG AAACTGATCG ACGACGGTCG CCATGCCGAC CTGCACATCA CCCTGTCCGG CGAGCAGGCC ACCGACCTGC AACGTCTTGC CGAAGGCTTG CAACAACTGC GCGAAACCCT GCCGCTGCTG CCGCAGGATC CGTACCTGTT GCTCAACCAC AACGGCTGGC AGAGCAAGAA CGTGCAGGAA CATCCGCTGC CGGACACCGA GCAGGTGGTG GCGGAAATCG CTAATGCTGC CGAAGGCCTG GATCTGGTCG GCTTCTATGC CGCCGGGCCG ATCAGCCGTG GTTTTGCCAG CTCTTCCGGC GCGTTCGGCT GGCATCAGGC CAACAGCTTC AACTTCGATT TCAGCCTGTT CCACGAGAAC GGCGAAGCGG TGAAAGCCAG CTACGCCGGG CATGACTGGA ACAGCGAAGA CTTCGCCAGA CGCATCCAGC AGGCCCGCGA GCAACTCGAA TTTCTGGGGC GGCCGCTGCG CACCCTGCCG CCCGGCCAAT ACCGCGCCTA CCTGGCGCCG GCAGCCCTGG AAGAAATCAT GGGCATGCTG TGCTGGGGTG GTTTCTCGGC GCAGTCGATT GCCAGCAAGA GCAGCCCGTT GCAGAAGCTG TATGCCGGCG ATCAGGCGTT CAGCCCGCTG GTGTCCCTCG ACGAGAAAGT CAGCGAATCG CTGAGCCCGG CGTTCTCCGG CGAAGGTTAC CCGCGCAGCG ATCTGCGGCT GATCATCGAA GGCAAAGCAG GTGACCAGTT GGTGGGTTCG CGCAGTGCCG CCGAGTACGG TCTGACGGCC AACGGTGCCA GCGGCGGCGA ATCGCCGAGC GCGCTGAACA TGGGCGCTGG TGATTTGCCT CAAGCGGAGA TTCTCAAGCA ACTGGGCACC GGGCTGTACA TCAGTAACCT GTGGTACCTG AATTTCTCGG ATCAACCGGC GGCGCGCCTG ACCGGGATGA CCCGGTTTGC TACCTTCTGG GTCGAGAACG GCGAGATTCA GGCGCCGGTC AGCACCATGC GTTTCGACGA CAGCGCCTAC AGCCTGCTGG GTTCGCAGCT GGAAGCGTTG ACCGCCGAGC GCGAGTTGCT GCTGTCGGCG AGCACCTACA GCCAGCGCAA TACCTCGTCG GCGCTGTTGC CGGGGGCGCT GGTGAGCCGA TTGACCCTGA CCCTGTAA
|
Protein sequence | MSISKNPSEA FKVLVNWLRD AVREPEQFTL SYDAESSAFV RFNHAKVRQA GQVQQAGIGL KLIDDGRHAD LHITLSGEQA TDLQRLAEGL QQLRETLPLL PQDPYLLLNH NGWQSKNVQE HPLPDTEQVV AEIANAAEGL DLVGFYAAGP ISRGFASSSG AFGWHQANSF NFDFSLFHEN GEAVKASYAG HDWNSEDFAR RIQQAREQLE FLGRPLRTLP PGQYRAYLAP AALEEIMGML CWGGFSAQSI ASKSSPLQKL YAGDQAFSPL VSLDEKVSES LSPAFSGEGY PRSDLRLIIE GKAGDQLVGS RSAAEYGLTA NGASGGESPS ALNMGAGDLP QAEILKQLGT GLYISNLWYL NFSDQPAARL TGMTRFATFW VENGEIQAPV STMRFDDSAY SLLGSQLEAL TAERELLLSA STYSQRNTSS ALLPGALVSR LTLTL
|
| |