Gene Pfl01_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5246 
Symbol 
ID3716197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5905308 
End bp5906645 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350974 
Protein GI77461467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.575633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT CCAAGAACCC GTCCGAGGCG TTCAAGGTGC TGGTCAACTG GCTGCGCGAT 
GCCGTGCGCG AGCCGGAACA GTTCACCCTG AGTTACGACG CCGAATCGTC GGCCTTCGTC
CGTTTCAACC ACGCCAAGGT GCGTCAGGCC GGGCAAGTTC AGCAAGCCGG TATCGGTCTG
AAACTGATCG ACGACGGTCG CCATGCCGAC CTGCACATCA CCCTGTCCGG CGAGCAGGCC
ACCGACCTGC AACGTCTTGC CGAAGGCTTG CAACAACTGC GCGAAACCCT GCCGCTGCTG
CCGCAGGATC CGTACCTGTT GCTCAACCAC AACGGCTGGC AGAGCAAGAA CGTGCAGGAA
CATCCGCTGC CGGACACCGA GCAGGTGGTG GCGGAAATCG CTAATGCTGC CGAAGGCCTG
GATCTGGTCG GCTTCTATGC CGCCGGGCCG ATCAGCCGTG GTTTTGCCAG CTCTTCCGGC
GCGTTCGGCT GGCATCAGGC CAACAGCTTC AACTTCGATT TCAGCCTGTT CCACGAGAAC
GGCGAAGCGG TGAAAGCCAG CTACGCCGGG CATGACTGGA ACAGCGAAGA CTTCGCCAGA
CGCATCCAGC AGGCCCGCGA GCAACTCGAA TTTCTGGGGC GGCCGCTGCG CACCCTGCCG
CCCGGCCAAT ACCGCGCCTA CCTGGCGCCG GCAGCCCTGG AAGAAATCAT GGGCATGCTG
TGCTGGGGTG GTTTCTCGGC GCAGTCGATT GCCAGCAAGA GCAGCCCGTT GCAGAAGCTG
TATGCCGGCG ATCAGGCGTT CAGCCCGCTG GTGTCCCTCG ACGAGAAAGT CAGCGAATCG
CTGAGCCCGG CGTTCTCCGG CGAAGGTTAC CCGCGCAGCG ATCTGCGGCT GATCATCGAA
GGCAAAGCAG GTGACCAGTT GGTGGGTTCG CGCAGTGCCG CCGAGTACGG TCTGACGGCC
AACGGTGCCA GCGGCGGCGA ATCGCCGAGC GCGCTGAACA TGGGCGCTGG TGATTTGCCT
CAAGCGGAGA TTCTCAAGCA ACTGGGCACC GGGCTGTACA TCAGTAACCT GTGGTACCTG
AATTTCTCGG ATCAACCGGC GGCGCGCCTG ACCGGGATGA CCCGGTTTGC TACCTTCTGG
GTCGAGAACG GCGAGATTCA GGCGCCGGTC AGCACCATGC GTTTCGACGA CAGCGCCTAC
AGCCTGCTGG GTTCGCAGCT GGAAGCGTTG ACCGCCGAGC GCGAGTTGCT GCTGTCGGCG
AGCACCTACA GCCAGCGCAA TACCTCGTCG GCGCTGTTGC CGGGGGCGCT GGTGAGCCGA
TTGACCCTGA CCCTGTAA
 
Protein sequence
MSISKNPSEA FKVLVNWLRD AVREPEQFTL SYDAESSAFV RFNHAKVRQA GQVQQAGIGL 
KLIDDGRHAD LHITLSGEQA TDLQRLAEGL QQLRETLPLL PQDPYLLLNH NGWQSKNVQE
HPLPDTEQVV AEIANAAEGL DLVGFYAAGP ISRGFASSSG AFGWHQANSF NFDFSLFHEN
GEAVKASYAG HDWNSEDFAR RIQQAREQLE FLGRPLRTLP PGQYRAYLAP AALEEIMGML
CWGGFSAQSI ASKSSPLQKL YAGDQAFSPL VSLDEKVSES LSPAFSGEGY PRSDLRLIIE
GKAGDQLVGS RSAAEYGLTA NGASGGESPS ALNMGAGDLP QAEILKQLGT GLYISNLWYL
NFSDQPAARL TGMTRFATFW VENGEIQAPV STMRFDDSAY SLLGSQLEAL TAERELLLSA
STYSQRNTSS ALLPGALVSR LTLTL