Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5245 |
Symbol | |
ID | 3716196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5903866 |
End bp | 5905308 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_350973 |
Protein GI | 77461466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.413306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.126132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATT TCCACCCCCA GCTCAAGCAG CGCTTTGCTG CCTTGCGCAC GGGCGCCGAG TTTTTTTCCC TGCGGTATGT ACGCGAGTCC GGCCAGTACC TGTCGGTGCG CAAGAACGTC GCCGAGCCGC CGAGCCTGAG CCGCGACGAA GGCGCGATGC TCACCGTGCG CGTCAACGGC GTCGAAGCCT ACGCCGCGAC CAATGACCTG TCGCAACAAG GCCTGCAAGC CGCCCTCGAG CGCGCCGAAC AGCAGGCCCG GCGGATCAAG CCCCACGCCC TGCTCGATCT GAGCCAGCAG CCGGTGTCCA GCGACCGCGC CGACTACTTT TCACCCAATC TCGAACAACC CTTTCCGTCC CTGAGCGAAT GCTTCGAGCT GCTCGGCGCG GAATCCGCCT CGGTGCCAAA GGATGAGCGC CTGGTGAATT GGGAAGTGAG CATCGGCATC ACCTACGTCG AACAGATCTA CCTGAGCAGC GCCGGCGCTG AATTGCGCCA GGCCCAGCGC TTCGTCTATC CGGGCCTGGA CGTCACCGCC TACGACGGCA ACGACAGCCA GACCCGCAGC CTCGGCCGCG AGAACTTCGG TCAGCAGGGC GGCGCCGACG TGATCAGCCG TTGCGGCCTG ATCGGTGCCG GCCCACAAGT CGCCGATCAG GCGCTGCAAC TGCTGCTCGC GCCGAACACC CCGCAAGGCC CGCGCGATTT GCTGCTGATG CCCGACCAGA TGATGCTGCA GATCCACGAA TCCATCGGCC ACCCGCTGGA ACTCGACCGG ATTCTCGGCG ACGAGCGCAA TTACGCCGGC ACCAGTTTCG TCAAAGCCTC GGATTTCGGC AGCCTGCAAT ACGGCTCGAA ACTGCTCAAC GTGACGTTCG ATCCGGGCAT TCCCGAAGAA CTGGCGAGTT ACGGTCACGA TGACGACGGT TCCAAGACCA GCAAGCAGTT TTTGATTCAC GAAGGCCTGC TGGTCCGTCC GTTGGGCGGC GCACTGTCGC AGTTCCGCGC GGGTCTGGAC GGCGTCGCCA ACAGCCGCGC CTGTGGCTGG AACCGCCCAC CGATCGATCG CATGGCCAAC CTTAACATCG AGCCGGGCGA CCAGCCGCTT GATCAGCTGA TCGGCGGCAT CGAAAACGGC ATCCTGATGA GCACCAACCG TTCGTGGTCG ATCGACGATG CGCGCAACAA ATTCCAGTTC GGCTGCGAAT GGGGCCAGTT GATCGAGAAC GGCGAACTCA AGGGCGTGGT GAAAAACCCG AACTACCGGG GCATTTCCGC GCACTTCTGG AAGAGCCTGC GCGCCGTCGG CAACGCCGGC ACCACCCAGG TGCTGGGCAC GCCGAACTGC GGCAAGGGCG AACCGAACCA GGTGATCCGC GTCGGCCATG CGTCGCCGGC CTGCGTGTTC AGCAATGTTG ATGTGTTTGG GGGAGACGCC TGA
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Protein sequence | MFNFHPQLKQ RFAALRTGAE FFSLRYVRES GQYLSVRKNV AEPPSLSRDE GAMLTVRVNG VEAYAATNDL SQQGLQAALE RAEQQARRIK PHALLDLSQQ PVSSDRADYF SPNLEQPFPS LSECFELLGA ESASVPKDER LVNWEVSIGI TYVEQIYLSS AGAELRQAQR FVYPGLDVTA YDGNDSQTRS LGRENFGQQG GADVISRCGL IGAGPQVADQ ALQLLLAPNT PQGPRDLLLM PDQMMLQIHE SIGHPLELDR ILGDERNYAG TSFVKASDFG SLQYGSKLLN VTFDPGIPEE LASYGHDDDG SKTSKQFLIH EGLLVRPLGG ALSQFRAGLD GVANSRACGW NRPPIDRMAN LNIEPGDQPL DQLIGGIENG ILMSTNRSWS IDDARNKFQF GCEWGQLIEN GELKGVVKNP NYRGISAHFW KSLRAVGNAG TTQVLGTPNC GKGEPNQVIR VGHASPACVF SNVDVFGGDA
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