Gene Pfl01_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5245 
Symbol 
ID3716196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5903866 
End bp5905308 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content64% 
IMG OID 
Productpeptidase U62, modulator of DNA gyrase 
Protein accessionYP_350973 
Protein GI77461466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.413306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.126132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATT TCCACCCCCA GCTCAAGCAG CGCTTTGCTG CCTTGCGCAC GGGCGCCGAG 
TTTTTTTCCC TGCGGTATGT ACGCGAGTCC GGCCAGTACC TGTCGGTGCG CAAGAACGTC
GCCGAGCCGC CGAGCCTGAG CCGCGACGAA GGCGCGATGC TCACCGTGCG CGTCAACGGC
GTCGAAGCCT ACGCCGCGAC CAATGACCTG TCGCAACAAG GCCTGCAAGC CGCCCTCGAG
CGCGCCGAAC AGCAGGCCCG GCGGATCAAG CCCCACGCCC TGCTCGATCT GAGCCAGCAG
CCGGTGTCCA GCGACCGCGC CGACTACTTT TCACCCAATC TCGAACAACC CTTTCCGTCC
CTGAGCGAAT GCTTCGAGCT GCTCGGCGCG GAATCCGCCT CGGTGCCAAA GGATGAGCGC
CTGGTGAATT GGGAAGTGAG CATCGGCATC ACCTACGTCG AACAGATCTA CCTGAGCAGC
GCCGGCGCTG AATTGCGCCA GGCCCAGCGC TTCGTCTATC CGGGCCTGGA CGTCACCGCC
TACGACGGCA ACGACAGCCA GACCCGCAGC CTCGGCCGCG AGAACTTCGG TCAGCAGGGC
GGCGCCGACG TGATCAGCCG TTGCGGCCTG ATCGGTGCCG GCCCACAAGT CGCCGATCAG
GCGCTGCAAC TGCTGCTCGC GCCGAACACC CCGCAAGGCC CGCGCGATTT GCTGCTGATG
CCCGACCAGA TGATGCTGCA GATCCACGAA TCCATCGGCC ACCCGCTGGA ACTCGACCGG
ATTCTCGGCG ACGAGCGCAA TTACGCCGGC ACCAGTTTCG TCAAAGCCTC GGATTTCGGC
AGCCTGCAAT ACGGCTCGAA ACTGCTCAAC GTGACGTTCG ATCCGGGCAT TCCCGAAGAA
CTGGCGAGTT ACGGTCACGA TGACGACGGT TCCAAGACCA GCAAGCAGTT TTTGATTCAC
GAAGGCCTGC TGGTCCGTCC GTTGGGCGGC GCACTGTCGC AGTTCCGCGC GGGTCTGGAC
GGCGTCGCCA ACAGCCGCGC CTGTGGCTGG AACCGCCCAC CGATCGATCG CATGGCCAAC
CTTAACATCG AGCCGGGCGA CCAGCCGCTT GATCAGCTGA TCGGCGGCAT CGAAAACGGC
ATCCTGATGA GCACCAACCG TTCGTGGTCG ATCGACGATG CGCGCAACAA ATTCCAGTTC
GGCTGCGAAT GGGGCCAGTT GATCGAGAAC GGCGAACTCA AGGGCGTGGT GAAAAACCCG
AACTACCGGG GCATTTCCGC GCACTTCTGG AAGAGCCTGC GCGCCGTCGG CAACGCCGGC
ACCACCCAGG TGCTGGGCAC GCCGAACTGC GGCAAGGGCG AACCGAACCA GGTGATCCGC
GTCGGCCATG CGTCGCCGGC CTGCGTGTTC AGCAATGTTG ATGTGTTTGG GGGAGACGCC
TGA
 
Protein sequence
MFNFHPQLKQ RFAALRTGAE FFSLRYVRES GQYLSVRKNV AEPPSLSRDE GAMLTVRVNG 
VEAYAATNDL SQQGLQAALE RAEQQARRIK PHALLDLSQQ PVSSDRADYF SPNLEQPFPS
LSECFELLGA ESASVPKDER LVNWEVSIGI TYVEQIYLSS AGAELRQAQR FVYPGLDVTA
YDGNDSQTRS LGRENFGQQG GADVISRCGL IGAGPQVADQ ALQLLLAPNT PQGPRDLLLM
PDQMMLQIHE SIGHPLELDR ILGDERNYAG TSFVKASDFG SLQYGSKLLN VTFDPGIPEE
LASYGHDDDG SKTSKQFLIH EGLLVRPLGG ALSQFRAGLD GVANSRACGW NRPPIDRMAN
LNIEPGDQPL DQLIGGIENG ILMSTNRSWS IDDARNKFQF GCEWGQLIEN GELKGVVKNP
NYRGISAHFW KSLRAVGNAG TTQVLGTPNC GKGEPNQVIR VGHASPACVF SNVDVFGGDA