Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5243 |
Symbol | |
ID | 3716194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5900387 |
End bp | 5901859 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | betaine aldehyde dehydrogenase |
Protein accession | YP_350971 |
Protein GI | 77461464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0991696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0622571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTT TCGAACTGCA AAAACTCTAC ATCGATGGCG CGTACTCCGA CGCCGGCAGC GATGCCACCT TCGAAGCCAT CAACCCGGCT AACGGTGAAG TCCTCGCACA CGTGCAACGT GCGACCAAGG AAGACGTCGA GCGTGCTGTG GTCAGCGCCG AAAAGGGCCA GAAAATCTGG GCCGCGATGA CCGCCATGGA GCGTTCGCGC ATCCTGCGTC GCGCCGTCGA CATCCTGCGC GAGCGCAACG ATGAACTGGC TGCCCTGGAA ACCCTGGACA CCGGTAAAGC CTTCTCCGAA ACCAAGTACG TCGACATCGT CACCGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTA CCCGCCATCG AAGGCGAGCA GATCCCGCTG CGTGACACTT CCTTCGTTTA CACCCGTCGC GAGCCGCTGG GCGTTGTCGC TGGTATCGGC GCGTGGAACT ACCCGATCCA GATCGCCCTG TGGAAATCCG CGCCAGCCTT GGCGGCCGGT AACGCGATGA TCTTCAAGCC AAGCGAAGTC ACATCGCTGA CCACCCTGAA ACTGGCTGAG ATCTACACCG AAGCCGGCGT TCCGAACGGC GTGTTCAACG TACTGACCGG CAGCGGCCGT GAAGTCGGCA CCTGGCTGAC CGAGCACCCG CGCATCGAGA AGATCTCTTT CACCGGCGGC ACCGACACCG GCAAGAAGGT CATGGCCAGC GCTTCGGCTT CGTCGCTCAA AGACGTGACC ATGGAACTGG GCGGCAAGTC CCCGCTGATC ATCTGCGACG ACGCCGATCT TGATCGCGCC GCCGACACCG CCATGATGGC CAACTTCTAC AGCTCCGGTC AGGTCTGCAC CAACGGCACT CGCGTGTTCG TGCCGAGCCA CCTGAAAGCC GCTTTCGAAG CCAAGATCGT CGAGCGCGTT GCGCGCATCC GCGTTGGCAA CCCGGAAGAC GAAAACACCA ACTTCGGCCC GCTGGTCAGC TTCCCGCACA TGGAAAGCGT GCTGGGCTAC ATCGCCAAGG GTAAAGAAGA AGGCGCCCGC GTTCTGTGCG GTGGCGAGCG TCTGACCGAC GGCGAATTCG CCAAAGGCGC GTTCGTGGCT CCAACCGTGT TCACCGACTG CACCGACGAC ATGACTATCG TCCGTGAAGA AATCTTCGGC CCGGTGATGG CGATCCTGAG CTACGAAACC GAAGAAGAAG TGATCCGTCG CGCCAACGAC ACCGACTTCG GCCTGGCCGC CGGCATCGTC ACCCGCGACC TGAACCGCGC GCACCGCGTG ATTCATCAAC TGGAAGCCGG TATCTGCTGG ATCAACGCCT GGGGCGAGTC CGACGCAAAA ATGCCGGTTG GCGGCTACAA GCAGTCGGGC GTCGGCCGTG AGAACGGCAT CAGCTCGCTG AACAACTTCA CTCGCATCAA ATCGGTGCAG GTCGAGCTGG GCGATTACGT CTCGGTGTTC TAA
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Protein sequence | MARFELQKLY IDGAYSDAGS DATFEAINPA NGEVLAHVQR ATKEDVERAV VSAEKGQKIW AAMTAMERSR ILRRAVDILR ERNDELAALE TLDTGKAFSE TKYVDIVTGA DVLEYYAGLV PAIEGEQIPL RDTSFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV TSLTTLKLAE IYTEAGVPNG VFNVLTGSGR EVGTWLTEHP RIEKISFTGG TDTGKKVMAS ASASSLKDVT MELGGKSPLI ICDDADLDRA ADTAMMANFY SSGQVCTNGT RVFVPSHLKA AFEAKIVERV ARIRVGNPED ENTNFGPLVS FPHMESVLGY IAKGKEEGAR VLCGGERLTD GEFAKGAFVA PTVFTDCTDD MTIVREEIFG PVMAILSYET EEEVIRRAND TDFGLAAGIV TRDLNRAHRV IHQLEAGICW INAWGESDAK MPVGGYKQSG VGRENGISSL NNFTRIKSVQ VELGDYVSVF
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