Gene Pfl01_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5243 
Symbol 
ID3716194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5900387 
End bp5901859 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content62% 
IMG OID 
Productbetaine aldehyde dehydrogenase 
Protein accessionYP_350971 
Protein GI77461464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0991696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0622571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT TCGAACTGCA AAAACTCTAC ATCGATGGCG CGTACTCCGA CGCCGGCAGC 
GATGCCACCT TCGAAGCCAT CAACCCGGCT AACGGTGAAG TCCTCGCACA CGTGCAACGT
GCGACCAAGG AAGACGTCGA GCGTGCTGTG GTCAGCGCCG AAAAGGGCCA GAAAATCTGG
GCCGCGATGA CCGCCATGGA GCGTTCGCGC ATCCTGCGTC GCGCCGTCGA CATCCTGCGC
GAGCGCAACG ATGAACTGGC TGCCCTGGAA ACCCTGGACA CCGGTAAAGC CTTCTCCGAA
ACCAAGTACG TCGACATCGT CACCGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTA
CCCGCCATCG AAGGCGAGCA GATCCCGCTG CGTGACACTT CCTTCGTTTA CACCCGTCGC
GAGCCGCTGG GCGTTGTCGC TGGTATCGGC GCGTGGAACT ACCCGATCCA GATCGCCCTG
TGGAAATCCG CGCCAGCCTT GGCGGCCGGT AACGCGATGA TCTTCAAGCC AAGCGAAGTC
ACATCGCTGA CCACCCTGAA ACTGGCTGAG ATCTACACCG AAGCCGGCGT TCCGAACGGC
GTGTTCAACG TACTGACCGG CAGCGGCCGT GAAGTCGGCA CCTGGCTGAC CGAGCACCCG
CGCATCGAGA AGATCTCTTT CACCGGCGGC ACCGACACCG GCAAGAAGGT CATGGCCAGC
GCTTCGGCTT CGTCGCTCAA AGACGTGACC ATGGAACTGG GCGGCAAGTC CCCGCTGATC
ATCTGCGACG ACGCCGATCT TGATCGCGCC GCCGACACCG CCATGATGGC CAACTTCTAC
AGCTCCGGTC AGGTCTGCAC CAACGGCACT CGCGTGTTCG TGCCGAGCCA CCTGAAAGCC
GCTTTCGAAG CCAAGATCGT CGAGCGCGTT GCGCGCATCC GCGTTGGCAA CCCGGAAGAC
GAAAACACCA ACTTCGGCCC GCTGGTCAGC TTCCCGCACA TGGAAAGCGT GCTGGGCTAC
ATCGCCAAGG GTAAAGAAGA AGGCGCCCGC GTTCTGTGCG GTGGCGAGCG TCTGACCGAC
GGCGAATTCG CCAAAGGCGC GTTCGTGGCT CCAACCGTGT TCACCGACTG CACCGACGAC
ATGACTATCG TCCGTGAAGA AATCTTCGGC CCGGTGATGG CGATCCTGAG CTACGAAACC
GAAGAAGAAG TGATCCGTCG CGCCAACGAC ACCGACTTCG GCCTGGCCGC CGGCATCGTC
ACCCGCGACC TGAACCGCGC GCACCGCGTG ATTCATCAAC TGGAAGCCGG TATCTGCTGG
ATCAACGCCT GGGGCGAGTC CGACGCAAAA ATGCCGGTTG GCGGCTACAA GCAGTCGGGC
GTCGGCCGTG AGAACGGCAT CAGCTCGCTG AACAACTTCA CTCGCATCAA ATCGGTGCAG
GTCGAGCTGG GCGATTACGT CTCGGTGTTC TAA
 
Protein sequence
MARFELQKLY IDGAYSDAGS DATFEAINPA NGEVLAHVQR ATKEDVERAV VSAEKGQKIW 
AAMTAMERSR ILRRAVDILR ERNDELAALE TLDTGKAFSE TKYVDIVTGA DVLEYYAGLV
PAIEGEQIPL RDTSFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTTLKLAE IYTEAGVPNG VFNVLTGSGR EVGTWLTEHP RIEKISFTGG TDTGKKVMAS
ASASSLKDVT MELGGKSPLI ICDDADLDRA ADTAMMANFY SSGQVCTNGT RVFVPSHLKA
AFEAKIVERV ARIRVGNPED ENTNFGPLVS FPHMESVLGY IAKGKEEGAR VLCGGERLTD
GEFAKGAFVA PTVFTDCTDD MTIVREEIFG PVMAILSYET EEEVIRRAND TDFGLAAGIV
TRDLNRAHRV IHQLEAGICW INAWGESDAK MPVGGYKQSG VGRENGISSL NNFTRIKSVQ
VELGDYVSVF