Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5242 |
Symbol | |
ID | 3716193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5899685 |
End bp | 5900278 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | transcriptional regulator BetI |
Protein accession | YP_350970 |
Protein GI | 77461463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.170653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0512317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGG TCGGTATGCA ACCCATCCGC CGCCAACAAC TGATCGAAGC CACTTTGCAG GCGGTTGATC AGGTCGGAAT GGGGGACGCC AGCATTGCGC TGATCGCCCG TTTGGCCGGT GTCTCGAATG GCATCATCAG TCACTATTTT CAGGACAAGA ACGGCCTGAT TGCCGCCACG ATGCGGTATC TGATGAGCGT CCTCAGCGAG AACGTCACCG CGCGCCGTCA GGCGCTGGCA GACAGCAGCC CCCGGGCGCA TCTGCAGGTG ATCATCGAAG GCAACTTCGA CGCCAGCCAG GTCAATGGCC CGGCAATGAA AACCTGGCTG GCCTTCTGGG CCACCAGCAT GCACCAGCCG TCTTTGCACA GGTTGCAGCG GATCAACGAT CACCGTCTGT ATTCCAACCT GTGCTGCGAG TTCCGCCGTG TGTTGCCGCT CGAAGATGCG CGCACCGCCG CCCGTGGACT GGCAGCTCTG ATCGACGGCT TGTGGTTACG CGGCGCGCTG TCGGGAGACG CTTTCGACAC TGCGCAGGCG CAACAGATCG CTTACGAATA CATGGATTTC CAATTGGCCA AGCAGGTGAG CTAG
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Protein sequence | MPKVGMQPIR RQQLIEATLQ AVDQVGMGDA SIALIARLAG VSNGIISHYF QDKNGLIAAT MRYLMSVLSE NVTARRQALA DSSPRAHLQV IIEGNFDASQ VNGPAMKTWL AFWATSMHQP SLHRLQRIND HRLYSNLCCE FRRVLPLEDA RTAARGLAAL IDGLWLRGAL SGDAFDTAQA QQIAYEYMDF QLAKQVS
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