Gene Pfl01_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5242 
Symbol 
ID3716193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5899685 
End bp5900278 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content60% 
IMG OID 
Producttranscriptional regulator BetI 
Protein accessionYP_350970 
Protein GI77461463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.170653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0512317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGG TCGGTATGCA ACCCATCCGC CGCCAACAAC TGATCGAAGC CACTTTGCAG 
GCGGTTGATC AGGTCGGAAT GGGGGACGCC AGCATTGCGC TGATCGCCCG TTTGGCCGGT
GTCTCGAATG GCATCATCAG TCACTATTTT CAGGACAAGA ACGGCCTGAT TGCCGCCACG
ATGCGGTATC TGATGAGCGT CCTCAGCGAG AACGTCACCG CGCGCCGTCA GGCGCTGGCA
GACAGCAGCC CCCGGGCGCA TCTGCAGGTG ATCATCGAAG GCAACTTCGA CGCCAGCCAG
GTCAATGGCC CGGCAATGAA AACCTGGCTG GCCTTCTGGG CCACCAGCAT GCACCAGCCG
TCTTTGCACA GGTTGCAGCG GATCAACGAT CACCGTCTGT ATTCCAACCT GTGCTGCGAG
TTCCGCCGTG TGTTGCCGCT CGAAGATGCG CGCACCGCCG CCCGTGGACT GGCAGCTCTG
ATCGACGGCT TGTGGTTACG CGGCGCGCTG TCGGGAGACG CTTTCGACAC TGCGCAGGCG
CAACAGATCG CTTACGAATA CATGGATTTC CAATTGGCCA AGCAGGTGAG CTAG
 
Protein sequence
MPKVGMQPIR RQQLIEATLQ AVDQVGMGDA SIALIARLAG VSNGIISHYF QDKNGLIAAT 
MRYLMSVLSE NVTARRQALA DSSPRAHLQV IIEGNFDASQ VNGPAMKTWL AFWATSMHQP
SLHRLQRIND HRLYSNLCCE FRRVLPLEDA RTAARGLAAL IDGLWLRGAL SGDAFDTAQA
QQIAYEYMDF QLAKQVS