Gene Pfl01_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5233 
Symbol 
ID3716184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5888373 
End bp5888849 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350961 
Protein GI77461454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0215792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TCACCACCTA CCAAACCCGC ATCATCCCCG ACTGGGTCGA CTACAACGGC 
CACCTGCGCG ACGCCTTCTA TCTGCTGATT TTCAGCTACG CCACCGACGC CCTGATGGAT
CGCCTCGGCA TGGACAGCAA CAACCGCGAA GCCAGCGGTC ACTCGCTGTT CACCCTCGAA
CTGCACCTCA ACTACTTGCA CGAAGTGAAG CTCGACGCCG AAGTCGAAGT GCGCACGCAG
ATCATCGGCC ACGACCAGAA ACGCCTGCAC CTCTATCACA GTCTGCACCT GGCCGGCGGT
GACAAGGAGC TGGCTGGCAA CGAACAGATG CTGCTGCACG TCGATCTGGC CGGGCCACGT
TCCGCACCGT TTACCCCGGA CACCCTGGAC CGTCTGCAAG CCATCGTCGC CGAGCAGGCC
GATCTGCCCG CTCCCGCTTA CATCGGCCGG GTCATCGCCC TGCCCCCAGC CCGGTAA
 
Protein sequence
MPTLTTYQTR IIPDWVDYNG HLRDAFYLLI FSYATDALMD RLGMDSNNRE ASGHSLFTLE 
LHLNYLHEVK LDAEVEVRTQ IIGHDQKRLH LYHSLHLAGG DKELAGNEQM LLHVDLAGPR
SAPFTPDTLD RLQAIVAEQA DLPAPAYIGR VIALPPAR