Gene Pfl01_5231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5231 
Symbol 
ID3716182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5886394 
End bp5887281 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350959 
Protein GI77461452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.225304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0225177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACG ACGTCATCAT CACCTGCGCA CTCACCGGTG CTGGCGACAC GACCGCCAAA 
AGCCCACACG TGCCGGTCAC CCCAAAACAG ATCGCAGCTG CCGCAGTAGA AGCGGCCAAG
GCCGGCGCCA CGGTCGTGCA CTGTCACGTT CGTGACCCGC AGACCGGCAA GTTCAGCCGC
GACGTGGCGC TGTACCGCGA AGTCATGGAG CGTATCCGCG AAGCCGACGT CGACATCATC
GTCAACCTCA CCGCCGGCAT GGGTGGCGAC CTGGAAATCG GCCCGGGCGA GAACCCGATG
GAGTTCGGCC CGAACACCGA TCTGGTCGGC CCGCTGACCC GCCTGGCCCA CGTCGAAGAA
CTGCTGCCGG AAATCTGCAC CCTGGATTGC GGCACCCTGA ACTTCGGTGA CGGCGACACC
ATTTATGTCT CCACCCCGGC CCAGCTGCGC GCCGGTGCCA AGCGCATCAC CGAGCTGGGC
GTGAAGGCGG AGCTGGAGAT TTTCGACACC GGCCACCTGT GGTTCGCCAA ACAGATGATC
AAGGAAGGCC TGCTCGACAA TCCGCTGTTC CAGCTGTGCC TGGGCATCCC GTGGGGCGCG
CCGGCCGACA CCACCACCAT GAAAGCCATG GTCGACAACC TGCCTGCCGA CGCGGTGTGG
GCCGGGTTCG GCATCGGCCG GATGCAGATG CCGATGGCCG CGCAAGCGGT ACTGCTCGGC
GGCAACGTGC GGGTCGGTCT GGAAGACAAC CTGTGGCTGG ACAAAGGCGT GCTGGCGACC
AACGGCCAAC TGGTCGAACG CGCCAGCGAA ATCCTCAGCC GCCTCGGCGC CCGCGTGCTG
ACCCCGGCTG AAGGTCGCAA GAAAATGGGC CTGACCCAGC GCGGCTGA
 
Protein sequence
MNHDVIITCA LTGAGDTTAK SPHVPVTPKQ IAAAAVEAAK AGATVVHCHV RDPQTGKFSR 
DVALYREVME RIREADVDII VNLTAGMGGD LEIGPGENPM EFGPNTDLVG PLTRLAHVEE
LLPEICTLDC GTLNFGDGDT IYVSTPAQLR AGAKRITELG VKAELEIFDT GHLWFAKQMI
KEGLLDNPLF QLCLGIPWGA PADTTTMKAM VDNLPADAVW AGFGIGRMQM PMAAQAVLLG
GNVRVGLEDN LWLDKGVLAT NGQLVERASE ILSRLGARVL TPAEGRKKMG LTQRG