Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5231 |
Symbol | |
ID | 3716182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5886394 |
End bp | 5887281 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350959 |
Protein GI | 77461452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.225304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0225177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACG ACGTCATCAT CACCTGCGCA CTCACCGGTG CTGGCGACAC GACCGCCAAA AGCCCACACG TGCCGGTCAC CCCAAAACAG ATCGCAGCTG CCGCAGTAGA AGCGGCCAAG GCCGGCGCCA CGGTCGTGCA CTGTCACGTT CGTGACCCGC AGACCGGCAA GTTCAGCCGC GACGTGGCGC TGTACCGCGA AGTCATGGAG CGTATCCGCG AAGCCGACGT CGACATCATC GTCAACCTCA CCGCCGGCAT GGGTGGCGAC CTGGAAATCG GCCCGGGCGA GAACCCGATG GAGTTCGGCC CGAACACCGA TCTGGTCGGC CCGCTGACCC GCCTGGCCCA CGTCGAAGAA CTGCTGCCGG AAATCTGCAC CCTGGATTGC GGCACCCTGA ACTTCGGTGA CGGCGACACC ATTTATGTCT CCACCCCGGC CCAGCTGCGC GCCGGTGCCA AGCGCATCAC CGAGCTGGGC GTGAAGGCGG AGCTGGAGAT TTTCGACACC GGCCACCTGT GGTTCGCCAA ACAGATGATC AAGGAAGGCC TGCTCGACAA TCCGCTGTTC CAGCTGTGCC TGGGCATCCC GTGGGGCGCG CCGGCCGACA CCACCACCAT GAAAGCCATG GTCGACAACC TGCCTGCCGA CGCGGTGTGG GCCGGGTTCG GCATCGGCCG GATGCAGATG CCGATGGCCG CGCAAGCGGT ACTGCTCGGC GGCAACGTGC GGGTCGGTCT GGAAGACAAC CTGTGGCTGG ACAAAGGCGT GCTGGCGACC AACGGCCAAC TGGTCGAACG CGCCAGCGAA ATCCTCAGCC GCCTCGGCGC CCGCGTGCTG ACCCCGGCTG AAGGTCGCAA GAAAATGGGC CTGACCCAGC GCGGCTGA
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Protein sequence | MNHDVIITCA LTGAGDTTAK SPHVPVTPKQ IAAAAVEAAK AGATVVHCHV RDPQTGKFSR DVALYREVME RIREADVDII VNLTAGMGGD LEIGPGENPM EFGPNTDLVG PLTRLAHVEE LLPEICTLDC GTLNFGDGDT IYVSTPAQLR AGAKRITELG VKAELEIFDT GHLWFAKQMI KEGLLDNPLF QLCLGIPWGA PADTTTMKAM VDNLPADAVW AGFGIGRMQM PMAAQAVLLG GNVRVGLEDN LWLDKGVLAT NGQLVERASE ILSRLGARVL TPAEGRKKMG LTQRG
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