Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5222 |
Symbol | |
ID | 3716467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5876130 |
End bp | 5878079 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350950 |
Protein GI | 77461443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00064431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00288183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGAACA CCCTTCTTCC AATCCTGTTG TTCGCAGCCC TGGCCCTTGC GGTGCTGGGG GCGTTGCGGC GGGTGGCCAT GTGGCGTCGG GGCCGGGCCT CGAAGGTCGA TCTGATCGGC GGCCTGTTCG CCATGCCCAA GCGTTACATG GTCGATCTGC ACCACGTGGT GGCGCGGGAC AAATACATCG CCAACACCCA CGTCGCCACG GCGGGCGGGG CGGTGGCGTC GATTGTGCTG GCGATTCTGG TGCACGGTTT CGGCCTGCAT AACCGGATCC TCGGCTACGC GTTGCTGCTG ATGACGGCGG TGATGTTCGT CGGGGCGATC TTCGTTTATC GGCGCCGGCT CAACCCGCCG GCGCGGCTGT CGAAAGGCCC GTGGATGCGC CTGCCGAAAA GCCTGCTGGC GTTCTCGGCC TCGTTCTTCC TGGTGACCTT GCCGGTGGCC GGAATCCTGC CGGAGAACTT CGGCGGCTGG GTGCTCGCAG CAATTCTCGG GATCGGTGTG CTGTGGGGTG TGTCCGAGTT GTTCTTCGGT ATGACCTGGG GCGGGCCGAT GAAACACGCC TTCGCCGGTG CCCTGCACCT GGCCTGGCAC CGTCGCGCCG AACGTTTTGG TGGCGGCCGT TCCACCGGTT TGAAACCGCT GGACCTGAAT GATCCGACCG CGCCGCTGGG CGTGGAGAAA CCCAAGGATT TCACCTGGAA CCAGTTGCTC GGTTTCGACG CCTGCGTGCA GTGCGGCAAG TGCGAAGCCG CGTGCCCGGC GTTCGCCGCC GGCCAGCCGT TGAACCCGAA AAAGCTGATT CAGGACATGG TCGTCGGCCT CGCCGGCGGC ACCGATGCCC AGTTCGCCGG CAGCCCGTAT CCGGGCAAAC CGGTGGGCGA ACACAGCGGC AATCCGCATC AACCGATCGT CAACGGTCTG GTCGATGCCG AAACCCTGTG GTCGTGCACC ACTTGCCGCG CCTGCGTCGA GGAATGCCCG ATGATGATCG AGCACGTCGA TGCCATCGTC GACATGCGCC GACACTTGAC CCTGGAAAAA GGCGCGACCC CGAACAAGGG CGCCGAAGTC CTGGAAAACC TGATCGCCAC CGACAACCCT GGCGGTTTTG CCCCGGGCGG ACGGATGAAC TGGGCGGCGG ACCTGAACCT CAACCTGCTC AGCGAGAAGA AGTCCACCGA CGTGCTGTTC TGGGTCGGCG ATGGCGCTTT CGACATGCGC AACCAGCGCA CTCTGCGGGC GTTCGTCAAA GTGCTGAAAG CGGCCAAGGT CGACTTCGCG GTGCTGGGTC TGGAAGAGCG CGACAGCGGC GACGTGGCCC GCCGTCTGGG TGACGAAGCG ACTTTCCAGC TGCTCGCCAA GCGCAATATC CAGACCCTGG CCAAATACAG CTTCAACCGC ATCGTTACCT GCGATCCGCA CAGTTTCCAC GTGCTGAAAA ACGAGTACGG CGCGTTCGAC GGCAACTACC TCGTGCAGCA CCACAGCACC TACCTGGCGG AAATCATCCA GGCCGGCGCG CTGAACCTCG GTCAGCACAA AGGCAACAGC GTGACCTACC ACGATCCGTG CTACCTCGGC CGCTACAACG GCGAGTACGA GGCACCGCGC GAAGTGCTGC GTGCGCTCGG CATCGAGATC AAGGAGATGC AACGTTCCGG CTTCCGTTCG CGCTGCTGCG GCGGCGGTGG CGGGGCGCCG ATCACTGACA TTCCGGGCAA GCAGCGGATC CCCGACATGC GCATGGAAGA CATCCGCGAG ACCGGCGCCG AGCTGGTGGC CGTGGGTTGT CCACAGTGCA CGGCGATGCT CGAAGGCGTG GTCGAACCGC GTCCGCTGAT CAAGGACATT GCCGAACTGG TGGCCGACGC GCTGCTCGAA GACGCCGCGC CGAACAAGCC TGCCACCCCG GCCAAGCGTG AACCTGCGGA GGCCCACTGA
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Protein sequence | MLNTLLPILL FAALALAVLG ALRRVAMWRR GRASKVDLIG GLFAMPKRYM VDLHHVVARD KYIANTHVAT AGGAVASIVL AILVHGFGLH NRILGYALLL MTAVMFVGAI FVYRRRLNPP ARLSKGPWMR LPKSLLAFSA SFFLVTLPVA GILPENFGGW VLAAILGIGV LWGVSELFFG MTWGGPMKHA FAGALHLAWH RRAERFGGGR STGLKPLDLN DPTAPLGVEK PKDFTWNQLL GFDACVQCGK CEAACPAFAA GQPLNPKKLI QDMVVGLAGG TDAQFAGSPY PGKPVGEHSG NPHQPIVNGL VDAETLWSCT TCRACVEECP MMIEHVDAIV DMRRHLTLEK GATPNKGAEV LENLIATDNP GGFAPGGRMN WAADLNLNLL SEKKSTDVLF WVGDGAFDMR NQRTLRAFVK VLKAAKVDFA VLGLEERDSG DVARRLGDEA TFQLLAKRNI QTLAKYSFNR IVTCDPHSFH VLKNEYGAFD GNYLVQHHST YLAEIIQAGA LNLGQHKGNS VTYHDPCYLG RYNGEYEAPR EVLRALGIEI KEMQRSGFRS RCCGGGGGAP ITDIPGKQRI PDMRMEDIRE TGAELVAVGC PQCTAMLEGV VEPRPLIKDI AELVADALLE DAAPNKPATP AKREPAEAH
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