Gene Pfl01_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5222 
Symbol 
ID3716467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5876130 
End bp5878079 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350950 
Protein GI77461443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00064431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00288183 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAACA CCCTTCTTCC AATCCTGTTG TTCGCAGCCC TGGCCCTTGC GGTGCTGGGG 
GCGTTGCGGC GGGTGGCCAT GTGGCGTCGG GGCCGGGCCT CGAAGGTCGA TCTGATCGGC
GGCCTGTTCG CCATGCCCAA GCGTTACATG GTCGATCTGC ACCACGTGGT GGCGCGGGAC
AAATACATCG CCAACACCCA CGTCGCCACG GCGGGCGGGG CGGTGGCGTC GATTGTGCTG
GCGATTCTGG TGCACGGTTT CGGCCTGCAT AACCGGATCC TCGGCTACGC GTTGCTGCTG
ATGACGGCGG TGATGTTCGT CGGGGCGATC TTCGTTTATC GGCGCCGGCT CAACCCGCCG
GCGCGGCTGT CGAAAGGCCC GTGGATGCGC CTGCCGAAAA GCCTGCTGGC GTTCTCGGCC
TCGTTCTTCC TGGTGACCTT GCCGGTGGCC GGAATCCTGC CGGAGAACTT CGGCGGCTGG
GTGCTCGCAG CAATTCTCGG GATCGGTGTG CTGTGGGGTG TGTCCGAGTT GTTCTTCGGT
ATGACCTGGG GCGGGCCGAT GAAACACGCC TTCGCCGGTG CCCTGCACCT GGCCTGGCAC
CGTCGCGCCG AACGTTTTGG TGGCGGCCGT TCCACCGGTT TGAAACCGCT GGACCTGAAT
GATCCGACCG CGCCGCTGGG CGTGGAGAAA CCCAAGGATT TCACCTGGAA CCAGTTGCTC
GGTTTCGACG CCTGCGTGCA GTGCGGCAAG TGCGAAGCCG CGTGCCCGGC GTTCGCCGCC
GGCCAGCCGT TGAACCCGAA AAAGCTGATT CAGGACATGG TCGTCGGCCT CGCCGGCGGC
ACCGATGCCC AGTTCGCCGG CAGCCCGTAT CCGGGCAAAC CGGTGGGCGA ACACAGCGGC
AATCCGCATC AACCGATCGT CAACGGTCTG GTCGATGCCG AAACCCTGTG GTCGTGCACC
ACTTGCCGCG CCTGCGTCGA GGAATGCCCG ATGATGATCG AGCACGTCGA TGCCATCGTC
GACATGCGCC GACACTTGAC CCTGGAAAAA GGCGCGACCC CGAACAAGGG CGCCGAAGTC
CTGGAAAACC TGATCGCCAC CGACAACCCT GGCGGTTTTG CCCCGGGCGG ACGGATGAAC
TGGGCGGCGG ACCTGAACCT CAACCTGCTC AGCGAGAAGA AGTCCACCGA CGTGCTGTTC
TGGGTCGGCG ATGGCGCTTT CGACATGCGC AACCAGCGCA CTCTGCGGGC GTTCGTCAAA
GTGCTGAAAG CGGCCAAGGT CGACTTCGCG GTGCTGGGTC TGGAAGAGCG CGACAGCGGC
GACGTGGCCC GCCGTCTGGG TGACGAAGCG ACTTTCCAGC TGCTCGCCAA GCGCAATATC
CAGACCCTGG CCAAATACAG CTTCAACCGC ATCGTTACCT GCGATCCGCA CAGTTTCCAC
GTGCTGAAAA ACGAGTACGG CGCGTTCGAC GGCAACTACC TCGTGCAGCA CCACAGCACC
TACCTGGCGG AAATCATCCA GGCCGGCGCG CTGAACCTCG GTCAGCACAA AGGCAACAGC
GTGACCTACC ACGATCCGTG CTACCTCGGC CGCTACAACG GCGAGTACGA GGCACCGCGC
GAAGTGCTGC GTGCGCTCGG CATCGAGATC AAGGAGATGC AACGTTCCGG CTTCCGTTCG
CGCTGCTGCG GCGGCGGTGG CGGGGCGCCG ATCACTGACA TTCCGGGCAA GCAGCGGATC
CCCGACATGC GCATGGAAGA CATCCGCGAG ACCGGCGCCG AGCTGGTGGC CGTGGGTTGT
CCACAGTGCA CGGCGATGCT CGAAGGCGTG GTCGAACCGC GTCCGCTGAT CAAGGACATT
GCCGAACTGG TGGCCGACGC GCTGCTCGAA GACGCCGCGC CGAACAAGCC TGCCACCCCG
GCCAAGCGTG AACCTGCGGA GGCCCACTGA
 
Protein sequence
MLNTLLPILL FAALALAVLG ALRRVAMWRR GRASKVDLIG GLFAMPKRYM VDLHHVVARD 
KYIANTHVAT AGGAVASIVL AILVHGFGLH NRILGYALLL MTAVMFVGAI FVYRRRLNPP
ARLSKGPWMR LPKSLLAFSA SFFLVTLPVA GILPENFGGW VLAAILGIGV LWGVSELFFG
MTWGGPMKHA FAGALHLAWH RRAERFGGGR STGLKPLDLN DPTAPLGVEK PKDFTWNQLL
GFDACVQCGK CEAACPAFAA GQPLNPKKLI QDMVVGLAGG TDAQFAGSPY PGKPVGEHSG
NPHQPIVNGL VDAETLWSCT TCRACVEECP MMIEHVDAIV DMRRHLTLEK GATPNKGAEV
LENLIATDNP GGFAPGGRMN WAADLNLNLL SEKKSTDVLF WVGDGAFDMR NQRTLRAFVK
VLKAAKVDFA VLGLEERDSG DVARRLGDEA TFQLLAKRNI QTLAKYSFNR IVTCDPHSFH
VLKNEYGAFD GNYLVQHHST YLAEIIQAGA LNLGQHKGNS VTYHDPCYLG RYNGEYEAPR
EVLRALGIEI KEMQRSGFRS RCCGGGGGAP ITDIPGKQRI PDMRMEDIRE TGAELVAVGC
PQCTAMLEGV VEPRPLIKDI AELVADALLE DAAPNKPATP AKREPAEAH