Gene Pfl01_5215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5215 
Symbol 
ID3716460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5863671 
End bp5864771 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID 
Productoxidoreductase FAD-binding region 
Protein accessionYP_350943 
Protein GI77461436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.11132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00973319 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAACA GCTTCCTGAA TCCGGTCACC ACCCAGACCT GGGCCAATGG CCGACACATC 
GTCCGTTGCG TCAAAGTCAT CCAGGAAACC TGGGATGTGC GCACCTTCTG CTTCATGGCC
GACCAGCCGA TCCTGTTCTT CTTCAAGCCC GGGCAGTTCG TGACCCTGGA GCTGGAGATC
GAAGGCCAGC CGATCATGCG TTCGTACACC ATCTCCAGCT CGCCGTCGGT GCCGTACAGT
TTTTCGGTGA CCATCAAGCG CGTGCCGGGG GGCAAGGTCT CCAACTGGTT GCACGACACC
CTGCATGAAG GCCAGGAGCT GGCGGTGCAC GGACCGGTCG GGCTGTTCAA CGCCATCGAT
TTCCCGAGCC CGAAAGTGCT CTACCTGAGC GGTGGCGTCG GAATCACCCC AGTGATGTCC
ATGGCGCGCT GGTTCTACGA CACCAACGGC AACGTCGACA TGACGTTCAT CCACAGTGCC
CGCTCGCCGA AAGACATCAT TTACCACCGC GAGCTGGAAC ACATGGCGTC GCGGATCGAC
AACTTCAGCC TGCACCTGAT CTGCGAAAAG CATGGGCTGG GCGAGCCGTG GGCCGGCTAT
CGCGGCTACC TCAACCACAA GATGCTCGAA CTGATGGTGC CGGACTTCCT CGAGCGCGAA
GTCTTCTGCT GCGGCCCGAC GCCGTACATG ACGGCGGTCA AACGCCTGCT GGAAAACGCC
GGCTACGACA TGAAGCGCTA TCACGAGGAA TCCTTCGGCG CCACGCCGCC GGAAGCCCGT
GCCGATGCGG TGGAGCAGGC CGAACAGGCA GCGGAAGCAC CGGAAGTGCC GGCGGCGGAT
CTGCACCTGG TGGAATTCAC CTCTTCGGAC AAGAGCATCC GTGTCGCGCC GGGCGAGACC
GTGCATGCGG CGGCTGCCAA GGTCGGCCTG ATGATCCCGA AAGCCTGCGG CATGGGGATC
TGCGGGACGT GCAAGGTGCT CAAGCTGGGC GGCGAGGTGG AGATGGATCA CAACGGCGGG
ATCACCGAGG ACGACGAGGC GGAGGGGTAC ATTCTTTCTT GCTGCAGTGT GCCGAAGGGG
GATGTTCGGA TCGAATATTG A
 
Protein sequence
MSNSFLNPVT TQTWANGRHI VRCVKVIQET WDVRTFCFMA DQPILFFFKP GQFVTLELEI 
EGQPIMRSYT ISSSPSVPYS FSVTIKRVPG GKVSNWLHDT LHEGQELAVH GPVGLFNAID
FPSPKVLYLS GGVGITPVMS MARWFYDTNG NVDMTFIHSA RSPKDIIYHR ELEHMASRID
NFSLHLICEK HGLGEPWAGY RGYLNHKMLE LMVPDFLERE VFCCGPTPYM TAVKRLLENA
GYDMKRYHEE SFGATPPEAR ADAVEQAEQA AEAPEVPAAD LHLVEFTSSD KSIRVAPGET
VHAAAAKVGL MIPKACGMGI CGTCKVLKLG GEVEMDHNGG ITEDDEAEGY ILSCCSVPKG
DVRIEY