Gene Pfl01_5212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5212 
Symbol 
ID3716457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5861290 
End bp5861775 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350940 
Protein GI77461433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00849207 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAACC CTGCCTACAT GACCATTACC GGCAAGACTC AAGGCCTTAT TTCAGCCGGG 
TGTTCGACCC CGGAATCGGT CGGCAACAAA TACCAAAAAG CCCATACCGA TGAAATCATG
GTGTTCGCCT TGAGCCATGA AATGCGCCGC GACAACAACC TCGGCAAAGC CGTCCACCAA
CCGGTCATCA TCACTAAAGC GGTCGACAAA TCCTCCCCCT TGCTGGCCCA GGCGCATTCG
AACAGCGAAG AACTCGAATG CACGATCAGC CTTTACCGAA CCTCGCCTCA AGGTCAGCAG
GAGAAGTTTT ATTCAATTTC CCTCGATGGG GCCGTTCTGG CTGAACTCTC GCAGGAAGTG
CCCCACGTCA TTCTGCAAAA CGACGCTCAA CCTCAAGAAC AACTGGCCAT TCGTTACCGC
GGCATCAGTT GGGTACACCA CATTGCGGGC ACCACCGGCC ATACCTCGTG GGGTAGCCAG
GATTGA
 
Protein sequence
MANPAYMTIT GKTQGLISAG CSTPESVGNK YQKAHTDEIM VFALSHEMRR DNNLGKAVHQ 
PVIITKAVDK SSPLLAQAHS NSEELECTIS LYRTSPQGQQ EKFYSISLDG AVLAELSQEV
PHVILQNDAQ PQEQLAIRYR GISWVHHIAG TTGHTSWGSQ D