Gene Pfl01_5200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5200 
Symbol 
ID3716523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5848163 
End bp5848939 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350928 
Protein GI77461421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATG GCACGAGCGC TGTAGCTGAA CGAGCCTGTG AACTACCCGA AACCAGCGCC 
TGCGCTGTCT GGAGACTTGT CATTCCCCTC GCCGACACCG ATCAGCTCCG GCAACTGCTG
GCCCAGTGCT CACTGGGCGA CCGCCGTGCC TTCGAAACGC TGTACCGCAG CATTGGCCCG
CGCTTGCACG GTGTTGCCTT GCGATTCATG GGGCGCCCGG ATCTGGCCGA GGAAGTGTTG
CAGGAAAGCC TCGCCAGCCT CACCGAAACG TTGCCGGAGG TTCCGGTGCC GGAGCGCGTG
TGGCATGGCG TTACCGCGCG GATCGAACCG AAAGTACTGC ATGTGCCCGA GAAGCGTCCG
TTCTGGAACT GGCTGCGGGT GACGGCGGCA CTGGCCTCAA TCGTGGTGCT GGTGTTCCTC
GGCTCGCTGT ACACCCACGA CGATGCCCGC TACCGCGCCA CCCTGCTGAG CGCCGACGCG
CAACCGGCGC TGAAGGTCGA GGCGCATGAT GATTACCTGC AAGTCGAACC GCTGACATTG
GCGGCTGTCG ATCCTCAGCG CAGTCTGGAG CTGTGGGCGA TTCCGGCTGA TGGCAAGCCA
ATTTCCCTGG GCGTGATCCC GGCGGGCGGC AAAGGCAAGG TTGAATTGAG CGACGCGCAG
AAGGCGCTGA TAGGCAAGCC GATTGCGTTG GCAGTCAGTC TTGAGCCGAA GGGTGGATCG
CCGACCGGGC AGCCGACGGG GCCGGTTCTT TATCAAGGAG CGTTGGCGGC GTTGTAG
 
Protein sequence
MMNGTSAVAE RACELPETSA CAVWRLVIPL ADTDQLRQLL AQCSLGDRRA FETLYRSIGP 
RLHGVALRFM GRPDLAEEVL QESLASLTET LPEVPVPERV WHGVTARIEP KVLHVPEKRP
FWNWLRVTAA LASIVVLVFL GSLYTHDDAR YRATLLSADA QPALKVEAHD DYLQVEPLTL
AAVDPQRSLE LWAIPADGKP ISLGVIPAGG KGKVELSDAQ KALIGKPIAL AVSLEPKGGS
PTGQPTGPVL YQGALAAL