Gene Pfl01_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5197 
Symbol 
ID3716520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5845892 
End bp5846395 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350925 
Protein GI77461418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.237409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCCC TCCTTGCACT GCTTTCCCTC GTCGCCCTGC CGGTCCTGGC AGCCGAGCCG 
ACCCTTTACG GACGCTATGA ATACATCGCA CTGCCGGAAA TCGGCGGCGA AGTGCTCAAG
GCCAAGATGG ACACTGGCGC GCTGACCGCC TCGCTGTCGG CCAAGGACAT CGAGACGTTC
AAACGCGACG GCGAAGACTG GGTGCGTTTC CGTCTGGCCA CCAAGGACGC CAGCAACAAG
GTGTACGAGC ACAAGATTGC GCGGATCAGC AAGATCAAGA GTCGCTCGGA TGAAGAAGAC
GAGGGCGAAA GCACCGAAGT GGCCAAGCGC CCGGTAGTCG ATCTGGAACT GTGCCTGGGC
GACGTCAAGC GTACCGTGGA GGTCAACCTG ACCGACCGCA GCAACTTCAA CTACCCGTTG
CTGATCGGTG CCAAGGCCCT GCGCGAGTTC GGCGCGGCGG TGAACCCGGC GCGGCGCTTC
ACGGCGGACA AGCCGGACTG CTAA
 
Protein sequence
MKSLLALLSL VALPVLAAEP TLYGRYEYIA LPEIGGEVLK AKMDTGALTA SLSAKDIETF 
KRDGEDWVRF RLATKDASNK VYEHKIARIS KIKSRSDEED EGESTEVAKR PVVDLELCLG
DVKRTVEVNL TDRSNFNYPL LIGAKALREF GAAVNPARRF TADKPDC