Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5196 |
Symbol | |
ID | 3716519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5845138 |
End bp | 5845818 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | DNA-binding response regulator CreB |
Protein accession | YP_350924 |
Protein GI | 77461417 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.247569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCATA TCCTGATTGT CGAAGACGAA GCGGCGATTG CCGACACGCT GATTTTTGCC TTGCAGGGCG AGGGCTTCAC CACGACCTGG CTGAGCCTGG GCGCGGCGGC GCTGGAGCAT CAGCGTCAGA CTCCGGCCGA TCTGATCATC CTCGACATCG GCCTGCCGGA CATCAGCGGC TTCGAGACCT GTAAACAGCT TCGTCGCTTC AGTGAAGTAC CGGTGCTGTT CCTCAGCGCG CGCAATGCCG AAATCGACCG GGTGGTGGGC CTGGAAATCG GAGCCGACGA TTACGTCGTC AAACCGTTTT CACCGCGAGA GGTGGCGGCC CGGGTCCGGG CGATTCTCAA GCGCATGGCG CCACGCCCGG TCATCGAAGC ATCCTCGGCG CTGTTTCGCA TCGATCCCGA ACGCGTGCAG ATCAGCTATC GCGGCCAGCC CCTGAGCCTG ACCCGCCATG AATTCCGATT GTTGCAATGC CTGCTCGAGC AACCCGAGCG GGTATTCAGC CGCGAGCAAT TGCTCGATGC GTTGGGCGTG GCGGCGGATG CCGGATACGA GCGCAGCATC GACAGCCATA TCAAAAGCGT GCGCGCCAAA TTGCGTCTCG TACGCGCCGA GGCCGAGCCG ATCCAGACCC ATCGCGGCCT CGGCTACAGC TACAGTCCGG GGAATAGCTG A
|
Protein sequence | MPHILIVEDE AAIADTLIFA LQGEGFTTTW LSLGAAALEH QRQTPADLII LDIGLPDISG FETCKQLRRF SEVPVLFLSA RNAEIDRVVG LEIGADDYVV KPFSPREVAA RVRAILKRMA PRPVIEASSA LFRIDPERVQ ISYRGQPLSL TRHEFRLLQC LLEQPERVFS REQLLDALGV AADAGYERSI DSHIKSVRAK LRLVRAEAEP IQTHRGLGYS YSPGNS
|
| |