Gene Pfl01_5196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5196 
Symbol 
ID3716519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5845138 
End bp5845818 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID 
ProductDNA-binding response regulator CreB 
Protein accessionYP_350924 
Protein GI77461417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.247569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATA TCCTGATTGT CGAAGACGAA GCGGCGATTG CCGACACGCT GATTTTTGCC 
TTGCAGGGCG AGGGCTTCAC CACGACCTGG CTGAGCCTGG GCGCGGCGGC GCTGGAGCAT
CAGCGTCAGA CTCCGGCCGA TCTGATCATC CTCGACATCG GCCTGCCGGA CATCAGCGGC
TTCGAGACCT GTAAACAGCT TCGTCGCTTC AGTGAAGTAC CGGTGCTGTT CCTCAGCGCG
CGCAATGCCG AAATCGACCG GGTGGTGGGC CTGGAAATCG GAGCCGACGA TTACGTCGTC
AAACCGTTTT CACCGCGAGA GGTGGCGGCC CGGGTCCGGG CGATTCTCAA GCGCATGGCG
CCACGCCCGG TCATCGAAGC ATCCTCGGCG CTGTTTCGCA TCGATCCCGA ACGCGTGCAG
ATCAGCTATC GCGGCCAGCC CCTGAGCCTG ACCCGCCATG AATTCCGATT GTTGCAATGC
CTGCTCGAGC AACCCGAGCG GGTATTCAGC CGCGAGCAAT TGCTCGATGC GTTGGGCGTG
GCGGCGGATG CCGGATACGA GCGCAGCATC GACAGCCATA TCAAAAGCGT GCGCGCCAAA
TTGCGTCTCG TACGCGCCGA GGCCGAGCCG ATCCAGACCC ATCGCGGCCT CGGCTACAGC
TACAGTCCGG GGAATAGCTG A
 
Protein sequence
MPHILIVEDE AAIADTLIFA LQGEGFTTTW LSLGAAALEH QRQTPADLII LDIGLPDISG 
FETCKQLRRF SEVPVLFLSA RNAEIDRVVG LEIGADDYVV KPFSPREVAA RVRAILKRMA
PRPVIEASSA LFRIDPERVQ ISYRGQPLSL TRHEFRLLQC LLEQPERVFS REQLLDALGV
AADAGYERSI DSHIKSVRAK LRLVRAEAEP IQTHRGLGYS YSPGNS