Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5189 |
Symbol | |
ID | 3716779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5836559 |
End bp | 5838985 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_350917 |
Protein GI | 77461410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.435834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.330016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTT CGCTAGACAC CTTGTTGCGC CCCAGTTTGC TGGCGGTCGC CATTGCCCTC TGCACCCCGC TGGCCAGCAG CCAACTGATC GCCGCTGAAC AGGCGTCGAG CGTACGCGCC TACAACCTGC CGGCGGCTCC GTTGTCGACC ACGCTGAACC AGATCGCCAG CCAGGGCGGC CTCACGCTGT CGCTGAACCC GTCGCTGGCG GCGGGCAAGA CCTCGGCGCC GGTCAACGGC CAATATGACG CGGCCGGCGC CCTGCGCGCG GCACTGCGCG GCACCGGTCT GCAACTGGAA CAGAGCGGCG CCGGCACCTA CACCCTGGTC GCCGTGCCGG AAGGCGTGAT GGCCCTGCCG GAAACCTCGG TGATCGGCGT GGAAAACTAC GAAAGCGCCT GGGGCCCGGT CGAAGGCTAC ACCGCCACCC GCACCGCCGC CGGCACCAAG ACCGACACTG CACTGGTCGA AGCACCGCGT TCGATTTCGG TCGCCACTCG CCAGCAAATG GAAGACCGTG GCGTGCACAG CCTCGATGAC GCCGTGCGCT ACATGCCGGG CATCACCGCC AGCAGCTACG GCAGCGACAC TCGCGCCGAC TGGCTGCGCG TGCGCGGCTT CGAACCGACC CAGTTCCTCG ACGGCCTGCC CCTGCCAAAA GGCGTGTACG CCAACCCGAA ACAGGAAACC TGGAACCTCG ACCGCCTCGC CCTGCTGCGC GGCCCGGCCT CGTCGGTATA CGGCCAGACC CCACCGGGCG GTTTGCTGGA CATGGTCAGC CGTCGCCCGA GCGATGTGCA GAGCAACGAA ATCCAGCTGC AATACGGCAG CGACAACCAC CGCCAGATCA ACTTCGCCAG CACCGGCAAG ATCGATGACG CTGGCCAGTT TCTCTACGGC CTCAGCGGTG TGGTACGTGA CAGCGGCACG CAGATCGACC ACGTCGACAA CAAGCGCTAC AACATCGCGC CGAGCCTGAC CTGGAACATC GACGACGACA CCAGATTCAC CCTGCTGACC CAGTTCACCC GCGACGATAC CGGCATCACC AGCCAGTTCC TGCCGGTGCA GGGCACCAAG ATCGACATGC CGTTCGGCAA GGTTTCCCAT CACAAGAACC TCGGCGATCC GGACTGGGAA TACTACGACC GCACCTACTA CGCGTTGGGC TATGCCTTCG AACATCGCCT GAACGATGTG TGGCAGTTCA AGCAGAACCT GCGCTACACC AAGTCGGATC TGTCGTTCCA GGGCATCACC GTCGGCTCCT ACCCGTTCAC TCAAGTGGAC AATGACGGCA ACGTCGGCCG CACGACCACC ATCGTCGACG AAGACATCAG CCAGTTCGCC GTGGACAACA ACTTCCAGGC CGACTTCGCC ACCGGCGACA TCCGCCACAC CCTGCTGCTG GGTCTGGATC ACCAGCGCAG CAACACCAAC TACACCTCGA TCTTCGGCAG CGCGCCGGAG ATCAACGTGA ACAATCCGAT CCATGGTCAG CCGATCGTGC GTCCGGCGCG CTCCACCGCG TTCTATGACT ACAACCAGAA GACCTACCAG ACCGGCCTCT ACGTTCAGGA CCAGATGGCC CTGGACCAAT GGCGCCTGAC CCTGGGCGGT CGTGAAGACT GGGTGCACAC CAGCACGCAA TTCATCAACA AGGGCGACGC CACCAACACC CAGCGTGACA AGGCGTTCAG CGGTAACGCG GCGATCAGCT ATGTCTTCGA CTCCGGTTTC GTGCCGTACC TGTCCTACGC CGAATCGTTC CAGCCGACCA CTGGCGCCGA CGCCTCGTCG ACCGAATCGC TCAAACCGAC CGAAGGCAAG CAGTGGGAAC TGGGCATCAA GTACCAGCCA CCGGGCAGCA AGACCCTGCT GACGGCGGCC GTGTATGACC TGACCCAGAA AAACGTTTCG GTCAGCTCGT TCGTCAACGG CGTATCGATC ACCAGCCAGA CCGGCGAAGT GAAGGTCAAA GGCCTGGAGC TGGAAGCCGT CTCCGACGTC ACCGATAACC TGAAGGTCAT CGCCGCGTAC ACCCTGGCCA AATCCGAAGT GCAGAACGGC GCCGACAAGG GCAACCGCCT GCAACTGATG CCGAACCAGC AAGCCTCGCT GTGGGCCGAT TACAGCTGGC ACAGCGGTGT GCTCGACGGC TTCGGCATCG GCGCCGGCGC GCGCTACACC GGCAACACCT ACGGCGACAA AGCCAATACC TGGCTGGGCA AGGCGGACGC GTACACCGTG TTCGACGCCG CCGTGCATTA CGACCTCGGC CGTCTGGACA ACAGCCTCAA AGGCGCGTCG CTGGCACTCA ACGCCACCAA TTTGCTGGAC AAGGACTACA TCTCCACTTG CGACAGCTTC TACTGCTACT ACGGCGACCA GCGCAGTGTC GTCGCCAGCG CCACTTACAA GTGGTAA
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Protein sequence | MSRSLDTLLR PSLLAVAIAL CTPLASSQLI AAEQASSVRA YNLPAAPLST TLNQIASQGG LTLSLNPSLA AGKTSAPVNG QYDAAGALRA ALRGTGLQLE QSGAGTYTLV AVPEGVMALP ETSVIGVENY ESAWGPVEGY TATRTAAGTK TDTALVEAPR SISVATRQQM EDRGVHSLDD AVRYMPGITA SSYGSDTRAD WLRVRGFEPT QFLDGLPLPK GVYANPKQET WNLDRLALLR GPASSVYGQT PPGGLLDMVS RRPSDVQSNE IQLQYGSDNH RQINFASTGK IDDAGQFLYG LSGVVRDSGT QIDHVDNKRY NIAPSLTWNI DDDTRFTLLT QFTRDDTGIT SQFLPVQGTK IDMPFGKVSH HKNLGDPDWE YYDRTYYALG YAFEHRLNDV WQFKQNLRYT KSDLSFQGIT VGSYPFTQVD NDGNVGRTTT IVDEDISQFA VDNNFQADFA TGDIRHTLLL GLDHQRSNTN YTSIFGSAPE INVNNPIHGQ PIVRPARSTA FYDYNQKTYQ TGLYVQDQMA LDQWRLTLGG REDWVHTSTQ FINKGDATNT QRDKAFSGNA AISYVFDSGF VPYLSYAESF QPTTGADASS TESLKPTEGK QWELGIKYQP PGSKTLLTAA VYDLTQKNVS VSSFVNGVSI TSQTGEVKVK GLELEAVSDV TDNLKVIAAY TLAKSEVQNG ADKGNRLQLM PNQQASLWAD YSWHSGVLDG FGIGAGARYT GNTYGDKANT WLGKADAYTV FDAAVHYDLG RLDNSLKGAS LALNATNLLD KDYISTCDSF YCYYGDQRSV VASATYKW
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