Gene Pfl01_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5188 
Symbol 
ID3716778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5835412 
End bp5836383 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative FecR 
Protein accessionYP_350916 
Protein GI77461409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.639422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.488195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG CCAGTTCTAG ACCGGTCCCG GCCCATGTGC TGGACGCGGC GATTGCCTGG 
CAATTGACCC TCGATTCCAG CACGCCGCTG GAGCGCGAAG AGTTTGCCAA ATGGCACGCG
GCCAACGAAG AACACGCTCG CGCCTGGCGT CAGCTGGGCA TGCTCGACCA GCGTTTCAGC
GTGGCCAAGG GCCCGGCACG CAGCGCGTTG CTGCAATCGC GCGAAGGCAT CCGCCGTCGG
GTACGCAAAC TGGGCAGCGG GCTGGCCAGT GTCGTGGCGG TGGTCGGTCT GGCGTTGTTT
GCCGGCGAAC GTTATCTGCC GCTGGATTAC TGGCTCGCCG ATCAACGCAC ATCCACCGGC
GAACAGCGCA CCGTGCGCCT GGCCGACGGC ACCGTACTCA ATCTGAATAC CCACAGCGCC
GTAGATGTCC GCTTCGATGA CAAGCAACGC CTGATCGTGT TGCAGGAAGG CGAAATCCTC
GTCGAAACCG GTCACGGCGA TGCGCGGCCG TTCATTGTCG AAACCGCCGA GGGCAGCATG
CGCGCCCTGG GCACGCGGTT TCTGGTCAAG CGCGAAGACG CCGGCACGCG CCTGAGCGTG
TTGCAGTCGG CGGTGGCGGC GCATCCGCAA TCCGATCCGC AGGAACAGAT CCTGCGCGAA
GGCCAGCAAG TGCTGATCCG CAATAACGGT CTGGATTCGG TGGTGGCGCT CACCCCCGGC
GCCGATGCCT GGACCCGCGG CATGCTGGTG GTGGATAACG CACGCCTGGA AGACCTGGTG
CATGAACTCG GCCGTTATCG TCGCGGCCAT CTGGGCATCG CGCCGGAAGT CGCCGACCTG
CGCATTACCG GCAGCTTCCC GCTGCACGAC ACCGACAAGG CGCTGAACGC CCTGCTGCCG
ACCCTGCCGG TGCAGATCGA ACAGCACACG CCATGGTGGG TGACCGTGGC CAAGGCGGAT
CCGAAGCCCT GA
 
Protein sequence
MSPASSRPVP AHVLDAAIAW QLTLDSSTPL EREEFAKWHA ANEEHARAWR QLGMLDQRFS 
VAKGPARSAL LQSREGIRRR VRKLGSGLAS VVAVVGLALF AGERYLPLDY WLADQRTSTG
EQRTVRLADG TVLNLNTHSA VDVRFDDKQR LIVLQEGEIL VETGHGDARP FIVETAEGSM
RALGTRFLVK REDAGTRLSV LQSAVAAHPQ SDPQEQILRE GQQVLIRNNG LDSVVALTPG
ADAWTRGMLV VDNARLEDLV HELGRYRRGH LGIAPEVADL RITGSFPLHD TDKALNALLP
TLPVQIEQHT PWWVTVAKAD PKP