Gene Pfl01_5183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5183 
Symbol 
ID3716773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5829193 
End bp5831370 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content62% 
IMG OID 
Productmalate synthase G 
Protein accessionYP_350911 
Protein GI77461404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000254657 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0797853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC ACGTTCAAGT CGGTGGCCTG CAGGTCGCCA AAGTCCTGTT CGACTTCGTG 
AACAACGAAG CCATTCCCGG TACCGGCCTC ACCGCCGACA AATTCTGGGA AGGTGCCGAC
AAGGTCATTC ACGACCTGGC GCCGAAGAAC AAAGCCCTAC TCGCCAAACG CGATGACTTC
CAGGCTCGTA TCGATGGCTG GCACCAGAGC CGTGCCGGTC AGCCCCACGA CGCCGTGGCC
TATAAAGCCT TCCTGCAAGA GATCGGTTAT CTGCTGCCAG AAGCGGCTGA TTTCCAGGCA
ACGACGCAAA ACGTCGATGA CGAAATCGCC CGTACCGCCG GCCCGCAACT CGTGGTCCCG
GTGATGAACG CCCGCTTCGC CCTCAACGCC TCGAACGCCC GCTGGGGTTC GCTGTACGAC
GCCCTGTATG GCACCGACGC CATCAGCGAA GCCGGCGGCG CGGAAAAAGG CAAAGGCTAC
AACAAGGTGC GTGGCGACAA AGTCATCGCC TTCGCCCGTG CGTTCCTCGA CGAAGCCGCG
CCATTGGCGA CCGGCTCCCA CGTCGATTCC ACCGGCTACA AGATCGCTGA CGGCAAACTG
GTCGTCACCC TCAAGGGCGG CAGCACCAGC GGCCTGCGCA ACGACGCACA GCTGATCGGC
TTCCAGGGCG ATGCCAATGC GCCGATTGCG ATCCTGCTGA AGAACAACGG CCTGCATTTC
GAAATCCAGA TCGACGCCAG CACCCCGGTC GGCCAGACCG ATGCCGCCGG CGTCAAAGAC
ATCCTGATGG AAGCGGCGCT GACCACCATC ATGGACTGCG AAGACTCCGT CGCTGCCGTC
GATGCCGACG ACAAAGTGGT GATCTACCGC AACTGGCTCG GCCTGATGAA GGGCGATCTG
GCGGAATCCG TGTCCAAGGG CGGCCAGACC TTTACCCGCA CCATGAACCC GGACCGCACC
TACACCAAGG TCGACGGCAG CGAACTGACC CTGCACGGCC GTTCGCTGTT GTTCGTGCGT
AACGTCGGTC ACCTGATGAC CATCGACGCG ATCCTCGACA AGCATGGCAA CGAAGTGCCG
GAAGGCATCC TCGATGGTCT GGTGACTTGC CTCGCGGCGA TGCACAACCT GAGCGGCAAC
ACTTCGCGCA AGAACACCCG CACCGGTTCC GTGTACATCG TTAAACCGAA AATGCACGGC
CCTGAAGAAG CGGCGTTCAC CAACGAGCTG TTCGGTCGCA TCGAAGACGT GTTGGGCCTC
AAGCGCAACA CCCTGAAAGT CGGGATCATG GACGAGGAAC GCCGCACCAC GGTCAACCTC
AAGGCCTGCA TCCAGGCGGC CAGCGAGCGC GTGGTGTTCA TCAACACCGG TTTCCTCGAC
CGCACCGGCG ACGAAATCCA CACCTCCATG GAAGCCGGCC CGATGGTGCG CAAGGCTGAC
ATGAAGGCCG AGAAATGGAT CGGCGCCTAC GAGAACTGGA ACGTCGATAT CGGTCTGAGC
ACCGGCCTGC AGGGTCGTGC GCAAATCGGT AAAGGCATGT GGGCGATGCC CGACCTGATG
GCAGCGATGC TCGAACAGAA AATCGCTCAC CCGCTGGCCG GCGCCAACAC TGCCTGGGTT
CCGTCGCCGA CCGCCGCTGC GCTGCACGCG CTGCACTACC ACAAGGTCGA CGTGTTCGCC
CGTCAGGCCG AGCTGGCCAA GCGTGCCCGC GCTTCGGTCG ATGACATCCT GACCATCCCG
CTGGCGGTCA ACCCGAACTG GACCCCGGAG CAGATCAAGA ACGAACTGGA CAACAATGCC
CAGGGCATTC TCGGTTACGT GGTGCGCTGG ATCGACCAGG GCGTGGGTTG CTCGAAGGTG
CCGGACATCA ACGACGTCGG CCTGATGGAA GACCGTGCGA CGCTGCGTAT CTCCAGCCAG
CACATCGCCA ACTGGCTGCG CCACGGTGTC GTCACCGAAG CGCAAGTGAT GGAAAGCCTC
AAGCGCATGG CGCCGGTGGT GGACCGTCAG AATGCCAACG ACCCGCTGTA CCGTCCGCTG
GCCCCGAACT TCGACAGCAA CATCGCCTTC CAGGCGGCGG TCGAACTGGT GATCGAGGGC
ACCAAACAGC CGAACGGCTA CACCGAGCCG GTCCTGCACC GTCGTCGTCG CGAGTTCAAG
GCTGCCAACG GCCTTTAA
 
Protein sequence
MTEHVQVGGL QVAKVLFDFV NNEAIPGTGL TADKFWEGAD KVIHDLAPKN KALLAKRDDF 
QARIDGWHQS RAGQPHDAVA YKAFLQEIGY LLPEAADFQA TTQNVDDEIA RTAGPQLVVP
VMNARFALNA SNARWGSLYD ALYGTDAISE AGGAEKGKGY NKVRGDKVIA FARAFLDEAA
PLATGSHVDS TGYKIADGKL VVTLKGGSTS GLRNDAQLIG FQGDANAPIA ILLKNNGLHF
EIQIDASTPV GQTDAAGVKD ILMEAALTTI MDCEDSVAAV DADDKVVIYR NWLGLMKGDL
AESVSKGGQT FTRTMNPDRT YTKVDGSELT LHGRSLLFVR NVGHLMTIDA ILDKHGNEVP
EGILDGLVTC LAAMHNLSGN TSRKNTRTGS VYIVKPKMHG PEEAAFTNEL FGRIEDVLGL
KRNTLKVGIM DEERRTTVNL KACIQAASER VVFINTGFLD RTGDEIHTSM EAGPMVRKAD
MKAEKWIGAY ENWNVDIGLS TGLQGRAQIG KGMWAMPDLM AAMLEQKIAH PLAGANTAWV
PSPTAAALHA LHYHKVDVFA RQAELAKRAR ASVDDILTIP LAVNPNWTPE QIKNELDNNA
QGILGYVVRW IDQGVGCSKV PDINDVGLME DRATLRISSQ HIANWLRHGV VTEAQVMESL
KRMAPVVDRQ NANDPLYRPL APNFDSNIAF QAAVELVIEG TKQPNGYTEP VLHRRRREFK
AANGL